Characterization of the Early Life Microbiota Development and Predominant Lactobacillus Species at Distinct Gut Segments of Low- and Normal-Birth-Weight Piglets

Time-course responses of ileal and fecal microbiota and metabolite profiles to antibiotics in cannulated pigs

(2018) Kan Gao et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Innate differences and colostrum-induced alterations of jejunal mucosal proteins in piglets with intra-uterine growth restriction

(2018) Xiaoqiu Wang et al.   BRITISH JOURNAL OF NUTRITION

Spatial Heterogeneity and Co-occurrence of Mucosal and Luminal Microbiome across Swine Intestinal Tract

(2018) Li Zhang et al.   Frontiers in Microbiology

Effects of Oat Bran on Nutrient Digestibility, Intestinal Microbiota, and Inflammatory Responses in the Hindgut of Growing Pigs

(2018) Beibei He et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Intrauterine Growth Restriction Affects the Proteomes of the Small Intestine, Liver, and Skeletal Muscle in Newborn Pigs

(2018) Junjun Wang et al.   JOURNAL OF NUTRITION

Differences in the Gut Microbiota Establishment and Metabolome Characteristics Between Low- and Normal-Birth-Weight Piglets During Early-Life

(2018) Na Li et al.   Frontiers in Microbiology

Composition and diversity of mucosa-associated microbiota along the entire length of the pig gastrointestinal tract; dietary influences

(2017) Jennifer Kelly et al.   ENVIRONMENTAL MICROBIOLOGY

Dietary pea fibre alters the microbial community and fermentation with increase in fibre degradation-associated bacterial groups in the colon of pigs

(2017) Y. Luo et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Microbiota–Host Transgenomic Metabolism, Bioactive Molecules from the Inside

(2017) Silvia Turroni et al.   JOURNAL OF MEDICINAL CHEMISTRY

Melatonin alleviates weanling stress in mice: Involvement of intestinal microbiota

(2017) Wenkai Ren et al.   JOURNAL OF PINEAL RESEARCH

Physiological alterations associated with intrauterine growth restriction in fetal pigs: Causes and insights for nutritional optimization

(2017) Junjun Wang et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

Differences in Microbiota Membership along the Gastrointestinal Tract of Piglets and Their Differential Alterations Following an Early-Life Antibiotic Intervention

(2017) Chunlong Mu et al.   Frontiers in Microbiology

Intestinal Microbiota-Derived GABA Mediates Interleukin-17 Expression during Enterotoxigenic Escherichia coli Infection

(2017) Wenkai Ren et al.   Frontiers in Immunology

From Dietary Fiber to Host Physiology: Short-Chain Fatty Acids as Key Bacterial Metabolites

(2016) Ara Koh et al.   CELL

The structural alteration of gut microbiota in low-birth-weight mice undergoing accelerated postnatal growth

(2016) Jingjing Wang et al.   Scientific Reports

Why Is Initial Bacterial Colonization of the Intestine Important to Infantsʼ and Childrenʼs Health?

(2015) Pearl D. Houghteling et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

A Preliminary Study Examining the Binding Capacity of Akkermansia muciniphila and Desulfovibrio spp., to Colonic Mucin in Health and Ulcerative Colitis

(2015) Helen Earley et al.   PLoS One

The Placental Microbiome Varies in Association with Low Birth Weight in Full-Term Neonates

(2015) Jia Zheng et al.   Nutrients

The Role of Microbial Amino Acid Metabolism in Host Metabolism

(2015) Evelien Neis et al.   Nutrients

The Dynamic Distribution of Porcine Microbiota across Different Ages and Gastrointestinal Tract Segments

(2015) Wenjing Zhao et al.   PLoS One

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations

(2014) Torey Looft et al.   ISME Journal

Temporal proteomic analysis reveals defects in small-intestinal development of porcine fetuses with intrauterine growth restriction

(2014) Xiaoqiu Wang et al.   JOURNAL OF NUTRITIONAL BIOCHEMISTRY

The gut microbiota, bacterial metabolites and colorectal cancer

(2014) Petra Louis et al.   NATURE REVIEWS MICROBIOLOGY

Analysis of the Intestinal Lumen Microbiota in an Animal Model of Colorectal Cancer

(2014) Qingchao Zhu et al.   PLoS One

Lactobacillus amylovorus Inhibits the TLR4 Inflammatory Signaling Triggered by Enterotoxigenic Escherichia coli via Modulation of the Negative Regulators and Involvement of TLR2 in Intestinal Caco-2 Cells and Pig Explants

(2014) Alberto Finamore et al.   PLoS One

Butyrate-Producing Bacteria, Including Mucin Degraders, from the Swine Intestinal Tract

(2013) Uri Y. Levine et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Lactobacillus salivarius: Bacteriocin and probiotic activity

(2013) S. Messaoudi et al.   FOOD MICROBIOLOGY

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Development of intestinal microbiota in infants and its impact on health

(2013) Sebastien Matamoros et al.   TRENDS IN MICROBIOLOGY

High-Throughput Sequence-Based Analysis of the Intestinal Microbiota of Weanling Pigs Fed Genetically Modified MON810 Maize Expressing Bacillus thuringiensis Cry1Ab (Bt Maize) for 31 Days

(2012) Stefan G. Buzoianu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PANDAseq: paired-end assembler for illumina sequences

(2012) Andre P Masella et al.   BMC BIOINFORMATICS

Bacteria as vitamin suppliers to their host: a gut microbiota perspective

(2012) Jean Guy LeBlanc et al.   CURRENT OPINION IN BIOTECHNOLOGY

Catch-up growth following intra-uterine growth-restriction programmes an insulin-resistant phenotype in adipose tissue

(2012) L M Berends et al.   INTERNATIONAL JOURNAL OF OBESITY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Probiotic supplement reduces risk of necrotizing enterocolitis and mortality in preterm very low-birth-weight infants: an updated meta-analysis of 20 randomized, controlled trials

(2012) Quanzhen Wang et al.   JOURNAL OF PEDIATRIC SURGERY

Functional interactions between the gut microbiota and host metabolism

(2012) Valentina Tremaroli et al.   NATURE

Human Intestinal Lumen and Mucosa-Associated Microbiota in Patients with Colorectal Cancer

(2012) Weiguang Chen et al.   PLoS One

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Establishment and development of intestinal microbiota in preterm neonates

(2011) Silvia Arboleya et al.   FEMS MICROBIOLOGY ECOLOGY

Effects of different starch sources on Bacillus spp. in intestinal tract and expression of intestinal development related genes of weanling piglets

(2011) Guo-Quan Han et al.   MOLECULAR BIOLOGY REPORTS

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Beneficial effect of oral administration of Lactobacillus casei strain Shirota on insulin resistance in diet-induced obesity mice

(2010) E. Naito et al.   JOURNAL OF APPLIED MICROBIOLOGY

Intrauterine Growth Restriction Modifies the Developmental Pattern of Intestinal Structure, Transcriptomic Profile, and Bacterial Colonization in Neonatal Pigs

(2010) Romain D'Inca et al.   JOURNAL OF NUTRITION

Intrauterine Growth Restriction Not Only Modifies the Cecocolonic Microbiota in Neonatal Rats But Also Affects Its Activity in Young Adult Rats

(2010) Pascale Fança-Berthon et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

Intrauterine Growth Restriction Delays Feeding-Induced Gut Adaptation in Term Newborn Pigs

(2010) Romain D’Inca et al.   Neonatology

Probiotic and Gut Lactobacilli and Bifidobacteria: Molecular Approaches to Study Diversity and Activity

(2009) Michiel Kleerebezem et al.   Annual Review of Microbiology

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Role of the Gut Microbiota in Energy Metabolism and Metabolic Disease

(2009) Patrice Cani et al.   CURRENT PHARMACEUTICAL DESIGN

Temporal Proteomic Analysis Reveals Continuous Impairment of Intestinal Development in Neonatal Piglets with Intrauterine Growth Restriction

(2009) Xiaoqiu Wang et al.   JOURNAL OF PROTEOME RESEARCH

Gut Microbiota and Its Possible Relationship With Obesity

(2009) John K. DiBaise et al.   MAYO CLINIC PROCEEDINGS