Nuclear receptor NR4A is required for patterning at the ends of the planarian anterior-posterior axis

Cell type transcriptome atlas for the planarianSchmidtea mediterranea

(2018) Christopher T. Fincher et al.   SCIENCE

Self-organization and progenitor targeting generate stable patterns in planarian regeneration

(2018) Kutay Deniz Atabay et al.   SCIENCE

Positional information specifies the site of organ regeneration and not tissue maintenance in planarians

(2018) Eric M Hill et al.   eLife

The Cellular and Molecular Basis for Planarian Regeneration

(2018) Peter W. Reddien   CELL

foxF-1 Controls Specification of Non-body Wall Muscle and Phagocytic Cells in Planarians

(2018) M. Lucila Scimone et al.   CURRENT BIOLOGY

Click and Fluoresce: A Bioorthogonally Activated Smart Probe for Wash-Free Fluorescent Labeling of Biomolecules

(2017) Xingyue Ji et al.   JOURNAL OF ORGANIC CHEMISTRY

Orthogonal muscle fibres have different instructive roles in planarian regeneration

(2017) M. Lucila Scimone et al.   NATURE

(Neo)blast from the past: new insights into planarian stem cell lineages

(2016) Shu Jun Zhu et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Nuclear receptor 4A (NR4A) family – orphans no more

(2016) Stephen Safe et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

Wnt, Ptk7, and FGFRL expression gradients control trunk positional identity in planarian regeneration

(2016) Rachel Lander et al.   eLife

Two FGFRL-Wnt circuits organize the planarian anteroposterior axis

(2016) M Lucila Scimone et al.   eLife

Novel monoclonal antibodies to study tissue regeneration in planarians

(2015) Kelly G Ross et al.   BMC DEVELOPMENTAL BIOLOGY

A Generic and Cell-Type-Specific Wound Response Precedes Regeneration in Planarians

(2015) Omri Wurtzel et al.   DEVELOPMENTAL CELL

Stem cell-dependent formation of a functional anterior regeneration pole in planarians requires Zic and Forkhead transcription factors

(2014) Matthias C. Vogg et al.   DEVELOPMENTAL BIOLOGY

Bayesian approach to single-cell differential expression analysis

(2014) Peter V Kharchenko et al.   NATURE METHODS

Full-length RNA-seq from single cells using Smart-seq2

(2014) Simone Picelli et al.   Nature Protocols

A forkhead Transcription Factor Is Wound-Induced at the Planarian Midline and Required for Anterior Pole Regeneration

(2014) M. Lucila Scimone et al.   PLoS Genetics

zic-1 Expression in Planarian Neoblasts after Injury Controls Anterior Pole Regeneration

(2014) Constanza Vásquez-Doorman et al.   PLoS Genetics

In situ hybridization protocol for enhanced detection of gene expression in the planarian Schmidtea mediterranea

(2013) Ryan S King et al.   BMC DEVELOPMENTAL BIOLOGY

Specialized progenitors and regeneration

(2013) P. W. Reddien   DEVELOPMENT

pbx is required for pole and eye regeneration in planarians

(2013) C.-C. G. Chen et al.   DEVELOPMENT

Transcription factors lhx1/5-1 and pitx are required for the maintenance and regeneration of serotonergic neurons in planarians

(2013) K. W. Currie et al.   DEVELOPMENT

PBX/extradenticle is required to re-establish axial structures and polarity during planarian regeneration

(2013) R. A. Blassberg et al.   DEVELOPMENT

A Pitx transcription factor controls the establishment and maintenance of the serotonergic lineage in planarians

(2013) M. Marz et al.   DEVELOPMENT

Smart-seq2 for sensitive full-length transcriptome profiling in single cells

(2013) Simone Picelli et al.   NATURE METHODS

Follistatin antagonizes Activin signaling and acts with Notum to direct planarian head regeneration

(2013) Rachel H. Roberts-Galbraith et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Muscle Cells Provide Instructions for Planarian Regeneration

(2013) Jessica N. Witchley et al.   Cell Reports

Tissue absence initiates regeneration through Follistatin-mediated inhibition of Activin signaling

(2013) Michael A Gaviño et al.   eLife

A molecular wound response program associated with regeneration initiation in planarians

(2012) D. Wenemoser et al.   GENES & DEVELOPMENT

Transcriptome Analysis of the Planarian Eye Identifies ovo as a Specific Regulator of Eye Regeneration

(2012) Sylvain W. Lapan et al.   Cell Reports

A LIM-homeobox gene is required for differentiation of Wnt-expressing cells at the posterior end of the planarian body

(2011) T. Hayashi et al.   DEVELOPMENT

Polarized notum Activation at Wounds Inhibits Wnt Function to Promote Planarian Head Regeneration

(2011) C. P. Petersen et al.   SCIENCE

Constitutive gene expression and the specification of tissue identity in adult planarian biology

(2011) Peter W. Reddien   TRENDS IN GENETICS

dlx and sp6-9 Control Optic Cup Regeneration in a Prototypic Eye

(2011) Sylvain W. Lapan et al.   PLoS Genetics

Expression of secreted Wnt pathway components reveals unexpected complexity of the planarian amputation response

(2010) Kyle A. Gurley et al.   DEVELOPMENTAL BIOLOGY

The use of lectins as markers for differentiated secretory cells in planarians

(2010) Ricardo M. Zayas et al.   DEVELOPMENTAL DYNAMICS

Protein Evolution by Molecular Tinkering: Diversification of the Nuclear Receptor Superfamily from a Ligand-Dependent Ancestor

(2010) Jamie T. Bridgham et al.   PLOS BIOLOGY

The TALE Class Homeobox Gene Smed-prep Defines the Anterior Compartment for Head Regeneration

(2010) Daniel A. Felix et al.   PLoS Genetics

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Emerging patterns in planarian regeneration

(2009) David J Forsthoefel et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Smed-Evi/Wntless is required for  -catenin-dependent and -independent processes during planarian regeneration

(2009) T. Adell et al.   DEVELOPMENT

Formaldehyde-based whole-mount in situ hybridization method for planarians

(2009) Bret J. Pearson et al.   DEVELOPMENTAL DYNAMICS

A wound-induced Wnt expression program controls planarian regeneration polarity

(2009) C. P. Petersen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gradients in Planarian Regeneration and Homeostasis

(2009) T. Adell et al.   Cold Spring Harbor Perspectives in Biology

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

A chemical method for fast and sensitive detection of DNA synthesis in vivo

(2008) A. Salic et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Smed- catenin-1 Is Required for Anteroposterior Blastema Polarity in Planarian Regeneration

(2007) C. P. Petersen et al.   SCIENCE