Dhh1 promotes autophagy-related protein translation during nitrogen starvation

eIF5A is required for autophagy by mediating ATG3 translation

(2018) Michal Lubas et al.   EMBO REPORTS

IUPred2A: context-dependent prediction of protein disorder as a function of redox state and protein binding

(2018) Bálint Mészáros et al.   NUCLEIC ACIDS RESEARCH

Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)

(2016) Daniel J Klionsky et al.   Autophagy

A novel translational control mechanism involving RNA structures within coding sequences

(2016) Jennifer Jungfleisch et al.   GENOME RESEARCH

ATPase activity of the DEAD-box protein Dhh1 controls processing body formation

(2016) Christopher Frederick Mugler et al.   eLife

A large-scale analysis of autophagy-related gene expression identifies new regulators of autophagy

(2015) Amélie Bernard et al.   Autophagy

Rph1/KDM4 Mediates Nutrient-Limitation Signaling that Leads to the Transcriptional Induction of Autophagy

(2015) Amélie Bernard et al.   CURRENT BIOLOGY

DDX6 Orchestrates Mammalian Progenitor Function through the mRNA Degradation and Translation Pathways

(2015) Ying Wang et al.   MOLECULAR CELL

A conserved mechanism of TOR-dependent RCK-mediated mRNA degradation regulates autophagy

(2015) Guowu Hu et al.   NATURE CELL BIOLOGY

How to control self-digestion: transcriptional, post-transcriptional, and post-translational regulation of autophagy

(2015) Yuchen Feng et al.   TRENDS IN CELL BIOLOGY

The 4E-BP Caf20p Mediates Both eIF4E-Dependent and Independent Repression of Translation

(2015) Lydia M. Castelli et al.   PLoS Genetics

Transcriptional Regulation by Pho23 Modulates the Frequency of Autophagosome Formation

(2014) Meiyan Jin et al.   CURRENT BIOLOGY

The Mechanism and Physiological Function of Macroautophagy

(2013) Daniel J. Klionsky et al.   Journal of Innate Immunity

Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation

(2013) Danielle L Swaney et al.   NATURE METHODS

SPARCS: a web server to analyze (un)structured regions in coding RNA sequences

(2013) Yang Zhang et al.   NUCLEIC ACIDS RESEARCH

An expanded tool kit for the auxin-inducible degron system in budding yeast

(2013) Magdalena Morawska et al.   YEAST

A Eukaryotic Translation Initiation Factor 4E-Binding Protein Promotes mRNA Decapping and Is Required for PUF Repression

(2012) N. H. Blewett et al.   MOLECULAR AND CELLULAR BIOLOGY

A unifying model for mTORC1-mediated regulation of mRNA translation

(2012) Carson C. Thoreen et al.   NATURE

Ume6 transcription factor is part of a signaling cascade that regulates autophagy

(2012) C. R. Bartholomew et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

FastCloning: a highly simplified, purification-free, sequence- and ligation-independent PCR cloning method

(2011) Chaokun Li et al.   BMC BIOTECHNOLOGY

Intermolecular Interactions within the Abundant DEAD-box Protein Dhh1 Regulate Its Activityin Vivo

(2011) Arnob Dutta et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The DExD/H box ATPase Dhh1 functions in translational repression, mRNA decay, and processing body dynamics

(2011) Johanna S. Carroll et al.   JOURNAL OF CELL BIOLOGY

Autophagy in immunity and inflammation

(2011) Beth Levine et al.   NATURE

TFEB Links Autophagy to Lysosomal Biogenesis

(2011) C. Settembre et al.   SCIENCE

The Rapamycin-sensitive Phosphoproteome Reveals That TOR Controls Protein Kinase A Toward Some But Not All Substrates

(2010) Alexandre Soulard et al.   MOLECULAR BIOLOGY OF THE CELL

Regulation of Translation Initiation in Eukaryotes: Mechanisms and Biological Targets

(2009) Nahum Sonenberg et al.   CELL

Autophagy, Immunity, and Microbial Adaptations

(2009) Vojo Deretic et al.   Cell Host & Microbe

Mammalian autophagy: core molecular machinery and signaling regulation

(2009) Zhifen Yang et al.   CURRENT OPINION IN CELL BIOLOGY

Two Beclin 1-binding proteins, Atg14L and Rubicon, reciprocally regulate autophagy at different stages

(2009) Kohichi Matsunaga et al.   NATURE CELL BIOLOGY

Global Analysis of Cdk1 Substrate Phosphorylation Sites Provides Insights into Evolution

(2009) L. J. Holt et al.   SCIENCE

A Multidimensional Chromatography Technology for In-depth Phosphoproteome Analysis

(2008) Claudio P. Albuquerque et al.   MOLECULAR & CELLULAR PROTEOMICS

Atg8 Controls Phagophore Expansion during Autophagosome Formation

(2008) Zhiping Xie et al.   MOLECULAR BIOLOGY OF THE CELL