Widespread selection for extremely high and low levels of secondary structure in coding sequences across all domains of life

Mosquito-Borne Human Viral Diseases: Why Aedes aegypti?

(2018) Jeffrey R. Powell   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Global importance of RNA secondary structures in protein-coding sequences

(2018) Markus Fricke et al.   BIOINFORMATICS

The antiviral piRNA response in mosquitoes?

(2018) Margus Varjak et al.   JOURNAL OF GENERAL VIROLOGY

The role of RNA structure in translational regulation by L7Ae protein in archaea

(2018) Lin Huang et al.   RNA

mRNAs and lncRNAs intrinsically form secondary structures with short end-to-end distances

(2018) Wan-Jung C. Lai et al.   Nature Communications

Human Virus-Derived Small RNAs Can Confer Antiviral Immunity in Mammals

(2017) Yang Qiu et al.   IMMUNITY

Ensembl 2018

(2017) Daniel R Zerbino et al.   NUCLEIC ACIDS RESEARCH

Temperature-responsive miRNAs in Drosophila orchestrate adaptation to different ambient temperatures

(2017) Isabel Fast et al.   RNA

Differences in codon bias and GC content contribute to the balanced expression of TLR7 and TLR9

(2016) Zachary R. Newman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Expression Atlas update—an integrated database of gene and protein expression in humans, animals and plants

(2015) Robert Petryszak et al.   NUCLEIC ACIDS RESEARCH

Dissecting the contributions of GC content and codon usage to gene expression in the model algaChlamydomonas reinhardtii

(2015) Rouhollah Barahimipour et al.   PLANT JOURNAL

Version 4.0 of PaxDb: Protein abundance data, integrated across model organisms, tissues, and cell-lines

(2015) Mingcong Wang et al.   PROTEOMICS

Tupaia small RNAs provide insights into function and evolution of RNAi-based transposon defense in mammals

(2015) David Rosenkranz et al.   RNA

Deciphering the rules by which dynamics of mRNA secondary structure affect translation efficiency in Saccharomyces cerevisiae

(2014) Yuanhui Mao et al.   NUCLEIC ACIDS RESEARCH

The long and short of antiviral defense: small RNA-based immunity in insects

(2014) Alfred W Bronkhorst et al.   Current Opinion in Virology

ViennaRNA Package 2.0

(2011) Ronny Lorenz et al.   Algorithms for Molecular Biology

Virus-derived siRNAs and piRNAs in immunity and pathogenesis

(2011) Shou-Wei Ding et al.   Current Opinion in Virology

Translation efficiency is determined by both codon bias and folding energy

(2010) Tamir Tuller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cis-acting RNA elements in human and animal plus-strand RNA viruses

(2009) Ying Liu et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Coding-Sequence Determinants of Gene Expression in Escherichia coli

(2009) G. Kudla et al.   SCIENCE

Estimating Translational Selection in Eukaryotic Genomes

(2008) M. dos Reis et al.   MOLECULAR BIOLOGY AND EVOLUTION