Current and emerging statistical techniques for aquatic telemetry data: A guide to analysing spatially discrete animal detections

Australia’s continental-scale acoustic tracking database and its automated quality control process

(2018) Xavier Hoenner et al.   Scientific Data

A spatial point process model to estimate individual centres of activity from passive acoustic telemetry data

(2018) Megan V. Winton et al.   Methods in Ecology and Evolution

Spatiotemporal modelling of marine movement data using Template Model Builder (TMB)

(2017) M Auger-Méthé et al.   MARINE ECOLOGY PROGRESS SERIES

Factors Influencing Postrelease Predation for a Catch-And-Release Tropical Flats Fishery with a High Predator Burden

(2017) Robert J. Lennox et al.   NORTH AMERICAN JOURNAL OF FISHERIES MANAGEMENT

The Ecology of Human Mobility

(2017) Mark G. Meekan et al.   TRENDS IN ECOLOGY & EVOLUTION

A hidden Markov movement model for rapidly identifying behavioral states from animal tracks

(2017) Kim Whoriskey et al.   Ecology and Evolution

Spatiotemporal modelling of marine movement data using Template Model Builder (TMB)

(2017) M Auger-Méthé et al.   MARINE ECOLOGY PROGRESS SERIES

Local overfishing may be avoided by examining parameters of a spatio-temporal model

(2017) Stuart Carson et al.   PLoS One

Interactive effects of sex and body size on the movement ecology of adfluvial bull trout (Salvelinus confluentus)

(2016) L.F.G. Gutowsky et al.   CANADIAN JOURNAL OF ZOOLOGY

Predator swamping reduces predation risk during nocturnal migration of juvenile salmon in a high-mortality landscape

(2016) Nathan B. Furey et al.   JOURNAL OF ANIMAL ECOLOGY

TMB: Automatic Differentiation and Laplace Approximation

(2016) Kasper Kristensen et al.   Journal of Statistical Software

Initiation of migration and movement rates of Atlantic salmon smolts in fresh water

(2015) Daniel S. Stich et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Applying Bayesian spatiotemporal models to fisheries bycatch in the Canadian Arctic

(2015) Aurelie Cosandey-Godin et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Contrasting movements and connectivity of reef-associated sharks using acoustic telemetry: implications for management

(2015) Mario Espinoza et al.   ECOLOGICAL APPLICATIONS

The importance of spatial models for estimating the strength of density dependence

(2015) James T. Thorson et al.   ECOLOGY

A generalized model for longitudinal short- and long-term mortality data for commercial fishery discards and recreational fishery catch-and-releases

(2015) Hugues P. Benoît et al.   ICES JOURNAL OF MARINE SCIENCE

Constructing, conducting and interpreting animal social network analysis

(2015) Damien R. Farine et al.   JOURNAL OF ANIMAL ECOLOGY

Effects of environmental variables on the movement and space use of coastal sea snakes over multiple temporal scales

(2015) Vinay Udyawer et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Multi-population analysis of Puget Sound steelhead survival and migration behavior

(2015) ME Moore et al.   MARINE ECOLOGY PROGRESS SERIES

Integrating acoustic telemetry into mark–recapture models to improve the precision of apparent survival and abundance estimates

(2015) Christine L. Dudgeon et al.   OECOLOGIA

Short-Term Fidelity, Habitat Use and Vertical Movement Behavior of the Black Rockfish Sebastes schlegelii as Determined by Acoustic Telemetry

(2015) Yingqiu Zhang et al.   PLoS One

Aquatic animal telemetry: A panoramic window into the underwater world

(2015) N. E. Hussey et al.   SCIENCE

Quantifying Delayed Mortality from Barotrauma Impairment in Discarded Red Snapper Using Acoustic Telemetry

(2015) Judson M. Curtis et al.   Marine and Coastal Fisheries

Anrpackage for analysing survival using continuous-time open capture-recapture models

(2015) David Fouchet et al.   Methods in Ecology and Evolution

Multi-population analysis of Puget Sound steelhead survival and migration behavior

(2015) ME Moore et al.   MARINE ECOLOGY PROGRESS SERIES

Telemetry reveals how catch and release affects prespawning migration in Atlantic salmon (Salmo salar)

(2014) Antoine Richard et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Seal encounters at sea: A contemporary spatial approach using R-INLA

(2014) Stuart Carson et al.   ECOLOGICAL MODELLING

Applying network methods to acoustic telemetry data: Modeling the movements of tropical marine fishes

(2014) J.T. Finn et al.   ECOLOGICAL MODELLING

Making connections in aquatic ecosystems with acoustic telemetry monitoring

(2014) Michael R Donaldson et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Mixed effects: a unifying framework for statistical modelling in fisheries biology

(2014) James T. Thorson et al.   ICES JOURNAL OF MARINE SCIENCE

Inter-island movements of scalloped hammerhead sharks (Sphyrna lewini) and seasonal connectivity in a marine protected area of the eastern tropical Pacific

(2014) James T. Ketchum et al.   MARINE BIOLOGY

Predictable temperature-regulated residency, movement and migration in a large, highly mobile marine predator (Negaprion brevirostris)

(2014) ST Kessel et al.   MARINE ECOLOGY PROGRESS SERIES

Markov models and network analysis reveal sex-specific differences in the space-use of a coastal apex predator

(2014) Kilian M. Stehfest et al.   OIKOS

Acoustic Telemetry Reveals Large-Scale Migration Patterns of Walleye in Lake Huron

(2014) Todd A. Hayden et al.   PLoS One

A quantitative approach to static sensor network design

(2014) Martin W. Pedersen et al.   Methods in Ecology and Evolution

Seasonality and site fidelity of the zebra shark, Stegostoma fasciatum, in southeast Queensland, Australia

(2013) Christine L. Dudgeon et al.   ANIMAL BEHAVIOUR

Network analysis of acoustic tracking data reveals the structure and stability of fish aggregations in the ocean

(2013) Kilian M. Stehfest et al.   ANIMAL BEHAVIOUR

Forebay use and entrainment rates of resident adult fish in a large hydropower reservoir

(2013) EG Martins et al.   Aquatic Biology

A spatial capture–recapture model to estimate fish survival and location from linear continuous monitoring arrays

(2013) Joshua K. Raabe et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Topography and biological noise determine acoustic detectability on coral reefs

(2013) E. F. Cagua et al.   CORAL REEFS

Herbivores in a small world: network theory highlights vulnerability in the function of herbivory on coral reefs

(2013) Rebecca J. Fox et al.   FUNCTIONAL ECOLOGY

Multi-tissue stable isotope analysis and acoustic telemetry reveal seasonal variability in the trophic interactions of juvenile bull sharks in a coastal estuary

(2013) Philip Matich et al.   JOURNAL OF ANIMAL ECOLOGY

Conservation, Spillover and Gene Flow within a Network of Northern European Marine Protected Areas

(2013) Mats Brockstedt Olsen Huserbråten et al.   PLoS One

A review of detection range testing in aquatic passive acoustic telemetry studies

(2013) S. T. Kessel et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

A toolbox for fitting complex spatial point process models using integrated nested Laplace approximation (INLA)

(2012) Janine B. Illian et al.   Annals of Applied Statistics

Adjusting survival estimates for premature transmitter failure: a case study from the Sacramento-San Joaquin Delta

(2012) Christopher M. Holbrook et al.   ENVIRONMENTAL BIOLOGY OF FISHES

Effect of pulsed gastric lavage on apparent survival of a juvenile fish in a natural system

(2012) Andrew B. Barbour et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

V-Track: software for analysing and visualising animal movement from acoustic telemetry detections

(2012) Hamish A. Campbell et al.   MARINE AND FRESHWATER RESEARCH

Estimating population size by spatially explicit capture-recapture

(2012) Murray G. Efford et al.   OIKOS

Developing a deeper understanding of animal movements and spatial dynamics through novel application of network analyses

(2012) David M. P. Jacoby et al.   Methods in Ecology and Evolution

Passive acoustic telemetry reveals highly variable home range and movement patterns among unicornfish within a marine reserve

(2011) A. Marshell et al.   CORAL REEFS

Site fidelity, residence time and movements of red snapper Lutjanus campechanus estimated with long-term acoustic monitoring

(2011) DT Topping et al.   MARINE ECOLOGY PROGRESS SERIES

Survival of Migrating Atlantic Salmon Smolts through the Penobscot River, Maine: a Prerestoration Assessment

(2011) Christopher M. Holbrook et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

State-space framework for estimating measurement error from double-tagging telemetry experiments

(2011) Arliss J. Winship et al.   Methods in Ecology and Evolution

From Graphs to Spatial Graphs

(2010) M.R.T. Dale et al.   Annual Review of Ecology Evolution and Systematics

Effects of river temperature and climate warming on stock-specific survival of adult migrating Fraser River sockeye salmon (Oncorhynchus nerka)

(2010) EDUARDO G. MARTINS et al.   GLOBAL CHANGE BIOLOGY

Maned wolf survival rate in central Brazil

(2010) R. Sollmann et al.   JOURNAL OF ZOOLOGY

Freshwater and marine migration and survival of endangered Cultus Lake sockeye salmon (Oncorhynchus nerka) smolts using POST, a large-scale acoustic telemetry array

(2009) David W. Welch et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Graph models of habitat mosaics

(2009) Dean L. Urban et al.   ECOLOGY LETTERS

Generalized linear mixed models: a practical guide for ecology and evolution

(2009) Benjamin M. Bolker et al.   TRENDS IN ECOLOGY & EVOLUTION

Variation in the performance of acoustic receivers and its implication for positioning algorithms in a riverine setting

(2008) Colin Ashley Simpfendorfer et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES