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Title
DNAmod: the DNA modification database
Authors
Keywords
DNA modifications, Nucleobases, Epigenomics
Journal
Journal of Cheminformatics
Volume 11, Issue 1, Pages -
Publisher
Springer Nature
Online
2019-04-24
DOI
10.1186/s13321-019-0349-4
References
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Related references
Note: Only part of the references are listed.- Database resources of the National Center for Biotechnology Information
- (2017) et al. NUCLEIC ACIDS RESEARCH
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- (2017) Jia-Jia Xuan et al. NUCLEIC ACIDS RESEARCH
- MODOMICS: a database of RNA modification pathways. 2017 update
- (2017) Pietro Boccaletto et al. NUCLEIC ACIDS RESEARCH
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- (2015) Holger Heyn et al. CELL
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- (2015) Robyn E. Hardisty et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- 5-Formylcytosine can be a stable DNA modification in mammals
- (2015) Martin Bachman et al. Nature Chemical Biology
- ChEBI in 2016: Improved services and an expanding collection of metabolites
- (2015) Janna Hastings et al. NUCLEIC ACIDS RESEARCH
- PubChemRDF: towards the semantic annotation of PubChem compound and substance databases
- (2015) Gang Fu et al. Journal of Cheminformatics
- InChI, the IUPAC International Chemical Identifier
- (2015) Stephen R Heller et al. Journal of Cheminformatics
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- (2014) Scott B. Rothbart et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Evolving insights on how cytosine methylation affects protein-DNA binding
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- Reversing DNA Methylation: Mechanisms, Genomics, and Biological Functions
- (2014) Hao Wu et al. CELL
- Chemical Methods for Decoding Cytosine Modifications in DNA
- (2014) Michael J. Booth et al. CHEMICAL REVIEWS
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- (2014) Toni Pfaffeneder et al. Nature Chemical Biology
- Quantitative sequencing of 5-formylcytosine in DNA at single-base resolution
- (2014) Michael J. Booth et al. Nature Chemistry
- Advances in the profiling of DNA modifications: cytosine methylation and beyond
- (2014) Nongluk Plongthongkum et al. NATURE REVIEWS GENETICS
- REBASE—a database for DNA restriction and modification: enzymes, genes and genomes
- (2014) Richard J. Roberts et al. NUCLEIC ACIDS RESEARCH
- The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery
- (2014) Michel Dumontier et al. Journal of Biomedical Semantics
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- (2012) Jonas Korlach et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
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- The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013
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- The Chemical Information Ontology: Provenance and Disambiguation for Chemical Data on the Biological Semantic Web
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- (2011) Noel M O'Boyle et al. Journal of Cheminformatics
- Identification of epigenetic DNA modifications with a protein nanopore
- (2010) Emma V. B. Wallace et al. CHEMICAL COMMUNICATIONS
- Recommendations for Standardized Description of and Nomenclature Concerning Oxidatively Damaged Nucleobases in DNA
- (2010) Marcus S. Cooke et al. CHEMICAL RESEARCH IN TOXICOLOGY
- The RNA modification database, RNAMDB: 2011 update
- (2010) W. A. Cantara et al. NUCLEIC ACIDS RESEARCH
- REPAIRtoire--a database of DNA repair pathways
- (2010) K. Milanowska et al. NUCLEIC ACIDS RESEARCH
- Biopython: freely available Python tools for computational molecular biology and bioinformatics
- (2009) P. J. A. Cock et al. BIOINFORMATICS
- HHMD: the human histone modification database
- (2009) Yan Zhang et al. NUCLEIC ACIDS RESEARCH
- Pybel: a Python wrapper for the OpenBabel cheminformatics toolkit
- (2008) Noel M O'Boyle et al. Chemistry Central Journal
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