The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013

Identifying aberrant pathways through integrated analysis of knowledge in pharmacogenomics

(2012) R. Hoehndorf et al.   BIOINFORMATICS

Natural product-likeness score revisited: an open-source, open-data implementation

(2012) Kalai Vanii Jayaseelan et al.   BMC BIOINFORMATICS

OLSVis: an animated, interactive visual browser for bio-ontologies

(2012) Steven Vercruysse et al.   BMC BIOINFORMATICS

MBRole: enrichment analysis of metabolomic data

(2011) M. Chagoyen et al.   BIOINFORMATICS

Controlled vocabularies and semantics in systems biology

(2011) M. Courtot et al.   Molecular Systems Biology

Rhea—a manually curated resource of biochemical reactions

(2011) Rafael Alcántara et al.   NUCLEIC ACIDS RESEARCH

The Gene Ontology: enhancements for 2011

(2011)   NUCLEIC ACIDS RESEARCH

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

(2011) R. Caspi et al.   NUCLEIC ACIDS RESEARCH

UniProt Knowledgebase: a hub of integrated protein data

(2011) M. Magrane et al.   Database-The Journal of Biological Databases and Curation

BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models

(2010) Chen Li et al.   BMC Systems Biology

Semantic Similarity for Automatic Classification of Chemical Compounds

(2010) João D. Ferreira et al.   PLoS Computational Biology

Chemical Entities of Biological Interest: an update

(2009) Paula de Matos et al.   NUCLEIC ACIDS RESEARCH

OWL 2: The next step for OWL

(2008) Bernardo Cuenca Grau et al.   Journal of Web Semantics

Reactome knowledgebase of human biological pathways and processes

(2008) L. Matthews et al.   NUCLEIC ACIDS RESEARCH

HMDB: a knowledgebase for the human metabolome

(2008) D. S. Wishart et al.   NUCLEIC ACIDS RESEARCH