Massively Parallel Fitness Profiling Reveals Multiple Novel Enzymes in Pseudomonas putida Lysine Metabolism

Increased glutarate production by blocking the glutaryl-CoA dehydrogenation pathway and a catabolic pathway involving l-2-hydroxyglutarate

(2018) Manman Zhang et al.   Nature Communications

Metabolic engineering of Corynebacterium glutamicum for the production of glutaric acid, a C5 dicarboxylic acid platform chemical

(2018) Hee Taek Kim et al.   METABOLIC ENGINEERING

Mutant phenotypes for thousands of bacterial genes of unknown function

(2018) Morgan N. Price et al.   NATURE

Widespread bacterial lysine degradation proceeding via glutarate and L-2-hydroxyglutarate

(2018) Sebastian Knorr et al.   Nature Communications

Metabolic engineering of Escherichia coli for the production of four-, five- and six-carbon lactams

(2017) Tong Un Chae et al.   METABOLIC ENGINEERING

Application of an Acyl-CoA Ligase from Streptomyces aizunensis for Lactam Biosynthesis

(2017) Jingwei Zhang et al.   ACS Synthetic Biology

A metabolic pathway for catabolizing levulinic acid in bacteria

(2017) Jacqueline M. Rand et al.   Nature Microbiology

A β-Alanine Catabolism Pathway Containing a Highly Promiscuous ω-Transaminase in the 12-Aminododecanate-Degrading Pseudomonas sp. Strain AAC

(2016) Matthew Wilding et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biochemical and Spectroscopic Characterization of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme from Pseudomonas syringae pv. phaseolicola PK2

(2016) Salette Martinez et al.   BIOCHEMISTRY

From dirt to industrial applications: Pseudomonas putida as a Synthetic Biology chassis for hosting harsh biochemical reactions

(2016) Pablo I Nikel et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Pseudomonas putida—a versatile host for the production of natural products

(2015) Anita Loeschcke et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Catalytic Mechanisms of Fe(II)- and 2-Oxoglutarate-dependent Oxygenases

(2015) Salette Martinez et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

FLOURY ENDOSPERM7encodes a regulator of starch synthesis and amyloplast development essential for peripheral endosperm development in rice

(2015) Long Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons

(2015) Kelly M. Wetmore et al.   mBio

Hierarchical management of carbon sources is regulated similarly by the CbrA/B systems in Pseudomonas aeruginosa and Pseudomonas putida

(2014) M. Valentini et al.   MICROBIOLOGY-SGM

Lignin Valorization: Improving Lignin Processing in the Biorefinery

(2014) A. J. Ragauskas et al.   SCIENCE

Genome-wide analysis of lysine catabolism in bacteria reveals new connections with osmotic stress resistance

(2013) Izabella AP Neshich et al.   ISME Journal

Identification of the Alternative Sigma Factor SigX Regulon and Its Implications for Pseudomonas aeruginosa Pathogenicity

(2013) A. Blanka et al.   JOURNAL OF BACTERIOLOGY

Chiral Hydroxylation at the Mononuclear Nonheme Fe(II) Center of 4-(S) Hydroxymandelate Synthase – A Structure-Activity Relationship Analysis

(2013) Cristiana M. L. Di Giuro et al.   PLoS One

DHTKD1 Mutations Cause 2-Aminoadipic and 2-Oxoadipic Aciduria

(2012) Katharina Danhauser et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Mechanism of Benzylic Hydroxylation by 4-Hydroxymandelate Synthase. A Computational Study

(2012) Anna Wójcik et al.   BIOCHEMISTRY

Transcription of the oprF Gene of Pseudomonas aeruginosa Is Dependent Mainly on the SigX Sigma Factor and Is Sucrose Induced

(2012) E. Bouffartigues et al.   JOURNAL OF BACTERIOLOGY

Design, implementation and practice of JBEI-ICE: an open source biological part registry platform and tools

(2012) T. S. Ham et al.   NUCLEIC ACIDS RESEARCH

DeviceEditor visual biological CAD canvas

(2012) Joanna Chen et al.   Journal of Biological Engineering

j5 DNA Assembly Design Automation Software

(2011) Nathan J. Hillson et al.   ACS Synthetic Biology

Enzymatic assembly of DNA molecules up to several hundred kilobases

(2009) Daniel G Gibson et al.   NATURE METHODS

New yeast recombineering tools for bacteria

(2009) Robert M.Q. Shanks et al.   PLASMID

A One Pot, One Step, Precision Cloning Method with High Throughput Capability

(2008) Carola Engler et al.   PLoS One