Ignoring stratigraphic age uncertainty leads to erroneous estimates of species divergence times under the fossilized birth–death process

The fossilized birth-death model for the analysis of stratigraphic range data under different speciation modes

(2018) Tanja Stadler et al.   JOURNAL OF THEORETICAL BIOLOGY

Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

(2018) Andrew Rambaut et al.   SYSTEMATIC BIOLOGY

The inseparability of sampling and time and its influence on attempts to unify the molecular and fossil records

(2018) Melanie J. Hopkins et al.   PALEOBIOLOGY

Closing the gap between palaeontological and neontological speciation and extinction rate estimates

(2018) Daniele Silvestro et al.   Nature Communications

Independent evolution of baleen whale gigantism linked to Plio-Pleistocene ocean dynamics

(2017) Graham J. Slater et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Testing the molecular clock using mechanistic models of fossil preservation and molecular evolution

(2017) Rachel C. M. Warnock et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Molecular phylogenetics and diversification of trap-jaw ants in the genera Anochetus and Odontomachus (Hymenoptera: Formicidae)

(2016) Fredrick J. Larabee et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Mosaicism in a new Eocene pufferfish highlights rapid morphological innovation near the origin of crown tetraodontiforms

(2016) Roger A. Close et al.   PALAEONTOLOGY

Bayesian phylogenetic estimation of fossil ages

(2016) Alexei J. Drummond et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Evidence for a Mid-Jurassic Adaptive Radiation in Mammals

(2015) Roger A. Close et al.   CURRENT BIOLOGY

The Fossil Calibration Database—A New Resource for Divergence Dating

(2015) Daniel T. Ksepka et al.   SYSTEMATIC BIOLOGY

Total-Evidence Dating under the Fossilized Birth–Death Process

(2015) Chi Zhang et al.   SYSTEMATIC BIOLOGY

Dating Tips for Divergence-Time Estimation

(2015) Joseph E. O’Reilly et al.   TRENDS IN GENETICS

Baleen boom and bust: a synthesis of mysticete phylogeny, diversity and disparity

(2015) F. G. Marx et al.   Royal Society Open Science

The fossilized birth-death process for coherent calibration of divergence-time estimates

(2014) T. A. Heath et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Calibration uncertainty in molecular dating analyses: there is no substitute for the prior evaluation of time priors

(2014) R. C. M. Warnock et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Using More Than the Oldest Fossils: Dating Osmundaceae with Three Bayesian Clock Approaches

(2014) G. W. Grimm et al.   SYSTEMATIC BIOLOGY

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

Bayesian Inference of Sampled Ancestor Trees for Epidemiology and Fossil Calibration

(2014) Alexandra Gavryushkina et al.   PLoS Computational Biology

A divergence dating analysis of turtles using fossil calibrations: an example of best practices

(2013) Walter G. Joyce et al.   JOURNAL OF PALEONTOLOGY

Modelling distributions of fossil sampling rates over time, space and taxa: assessment and implications for macroevolutionary studies

(2013) Peter J. Wagner et al.   Methods in Ecology and Evolution

Trees of Unusual Size: Biased Inference of Early Bursts from Large Molecular Phylogenies

(2012) Matthew W. Pennell et al.   PLoS One

Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny

(2012) M. dos Reis et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A Hierarchical Bayesian Model for Calibrating Estimates of Species Divergence Times

(2012) Tracy A. Heath   SYSTEMATIC BIOLOGY

Exploring uncertainty in the calibration of the molecular clock

(2011) R. C. M. Warnock et al.   Biology Letters

Establishing a time-scale for plant evolution

(2011) John T. Clarke et al.   NEW PHYTOLOGIST

Mammalian phylogeny reveals recent diversification rate shifts

(2011) T. Stadler   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification

(2011) R. W. Meredith et al.   SCIENCE

Calibrated Tree Priors for Relaxed Phylogenetics and Divergence Time Estimation

(2011) Joseph Heled et al.   SYSTEMATIC BIOLOGY

Best Practices for Justifying Fossil Calibrations

(2011) James F. Parham et al.   SYSTEMATIC BIOLOGY

Simulating Trees with a Fixed Number of Extant Species

(2011) Tanja Stadler   SYSTEMATIC BIOLOGY

Sampling-through-time in birth–death trees

(2010) Tanja Stadler   JOURNAL OF THEORETICAL BIOLOGY

Diversity versus disparity and the radiation of modern cetaceans

(2010) G. J. Slater et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Divergence date estimation and a comprehensive molecular tree of extant cetaceans

(2009) Michael R. McGowen et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Accounting for Calibration Uncertainty in Phylogenetic Estimation of Evolutionary Divergence Times

(2009) Simon Y. W. Ho et al.   SYSTEMATIC BIOLOGY

Radiation of Extant Cetaceans Driven by Restructuring of the Oceans

(2009) Mette E. Steeman et al.   SYSTEMATIC BIOLOGY