A Hierarchical Bayesian Model for Calibrating Estimates of Species Divergence Times

Tectonic calibrations in molecular dating

(2016) Ullasa Kodandaramaiah   Current Zoology

Exploring uncertainty in the calibration of the molecular clock

(2011) R. C. M. Warnock et al.   Biology Letters

A Dirichlet Process Prior for Estimating Lineage-Specific Substitution Rates

(2011) T. A. Heath et al.   MOLECULAR BIOLOGY AND EVOLUTION

Integrating Fossil Preservation Biases in the Selection of Calibrations for Molecular Divergence Time Estimation

(2011) Alex Dornburg et al.   SYSTEMATIC BIOLOGY

Calibrated Tree Priors for Relaxed Phylogenetics and Divergence Time Estimation

(2011) Joseph Heled et al.   SYSTEMATIC BIOLOGY

Divergence Time Estimation Using Fossils as Terminal Taxa and the Origins of Lissamphibia

(2011) R. Alexander Pyron   SYSTEMATIC BIOLOGY

Evaluating Fossil Calibrations for Dating Phylogenies in Light of Rates of Molecular Evolution: A Comparison of Three Approaches

(2011) Vimoksalehi Lukoschek et al.   SYSTEMATIC BIOLOGY

Taxonomic Structure of the Fossil Record is Shaped by Sampling Bias

(2011) Graeme T. Lloyd et al.   SYSTEMATIC BIOLOGY

Simulating Trees with a Fixed Number of Extant Species

(2011) Tanja Stadler   SYSTEMATIC BIOLOGY

DendroPy: a Python library for phylogenetic computing

(2010) J. Sukumaran et al.   BIOINFORMATICS

Bayesian random local clocks, or one rate to rule them all

(2010) Alexei J Drummond et al.   BMC BIOLOGY

Phylogenetic relationships of the Cretaceous frog Beelzebufo from Madagascar and the placement of fossil constraints based on temporal and phylogenetic evidence

(2010) S. RUANE et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Sampling-through-time in birth–death trees

(2010) Tanja Stadler   JOURNAL OF THEORETICAL BIOLOGY

A Bayesian Phylogenetic Method to Estimate Unknown Sequence Ages

(2010) B. Shapiro et al.   MOLECULAR BIOLOGY AND EVOLUTION

Sampling Trees from Evolutionary Models

(2010) Klaas Hartmann et al.   SYSTEMATIC BIOLOGY

Dating Primate Divergences through an Integrated Analysis of Palaeontological and Molecular Data

(2010) Richard D. Wilkinson et al.   SYSTEMATIC BIOLOGY

Using Fossils to Break Long Branches in Molecular Dating: A Comparison of Relaxed Clocks Applied to the Origin of Angiosperms

(2010) Susana Magallón   SYSTEMATIC BIOLOGY

Combining Phylogenomics and Fossils in Higher-Level Squamate Reptile Phylogeny: Molecular Data Change the Placement of Fossil Taxa

(2010) John J. Wiens et al.   SYSTEMATIC BIOLOGY

On incomplete sampling under birth–death models and connections to the sampling-based coalescent

(2009) Tanja Stadler   JOURNAL OF THEORETICAL BIOLOGY

Phylogeny and biogeography of Alangiaceae (Cornales) inferred from DNA sequences, morphology, and fossils

(2009) Chun-Miao Feng et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Fourteen nuclear genes provide phylogenetic resolution for difficult nodes in the turtle tree of life

(2009) Anthony J. Barley et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Accounting for Calibration Uncertainty in Phylogenetic Estimation of Evolutionary Divergence Times

(2009) Simon Y. W. Ho et al.   SYSTEMATIC BIOLOGY

A Simple Method for Bracketing Absolute Divergence Times on Molecular Phylogenies Using Multiple Fossil Calibration Points

(2008) Charles R. Marshall   AMERICAN NATURALIST

Selection of Fossils for Calibration of Molecular Dating Models1

(2008) Maria A. Gandolfo et al.   ANNALS OF THE MISSOURI BOTANICAL GARDEN

The conditioned reconstructed process

(2008) Tanja Gernhard   JOURNAL OF THEORETICAL BIOLOGY

Phylogenetic uncertainty and molecular clock calibrations: A case study of legless lizards (Pygopodidae, Gekkota)

(2008) M.S.Y. Lee et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION