DNA aptamers for the recognition of HMGB1 from Plasmodium falciparum

Aptamer-mediated Plasmodium -specific diagnosis of malaria

(2018) Yee-Wai Cheung et al.   BIOCHIMIE

A portable microfluidic Aptamer-Tethered Enzyme Capture (APTEC) biosensor for malaria diagnosis

(2018) Lewis A. Fraser et al.   BIOSENSORS & BIOELECTRONICS

Towards development of aptamers that specifically bind to lactate dehydrogenase of Plasmodium falciparum through epitopic targeting

(2018) Kelly-Anne Frith et al.   MALARIA JOURNAL

SWISS-MODEL: homology modelling of protein structures and complexes

(2018) Andrew Waterhouse et al.   NUCLEIC ACIDS RESEARCH

Probabilistic data integration identifies reliable gametocyte-specific proteins and transcripts in malaria parasites

(2018) Lisette Meerstein-Kessel et al.   Scientific Reports

Identification of Plasmodium falciparum isolates lacking histidine-rich protein 2 and 3 in Eritrea

(2017) Michela Menegon et al.   INFECTION GENETICS AND EVOLUTION

Selection of DNA aptamers with two modified bases

(2017) Bharat N. Gawande et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Three-dimensional modeling of single stranded DNA hairpins for aptamer-based biosensors

(2017) Iman Jeddi et al.   Scientific Reports

Embracing proteins: structural themes in aptamer–protein complexes

(2016) Amy D Gelinas et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Evoking picomolar binding in RNA by a single phosphorodithioate linkage

(2016) N. Dinuka Abeydeera et al.   NUCLEIC ACIDS RESEARCH

APTEC: aptamer-tethered enzyme capture as a novel rapid diagnostic test for malaria

(2015) Roderick M. Dirkzwager et al.   CHEMICAL COMMUNICATIONS

Disruption of Parasitehmgb2Gene Attenuates Plasmodium berghei ANKA Pathogenicity

(2015) Sylvie Briquet et al.   INFECTION AND IMMUNITY

FASTAptamer: A Bioinformatic Toolkit for High-throughput Sequence Analysis of Combinatorial Selections

(2015) Khalid K Alam et al.   Molecular Therapy-Nucleic Acids

ZDOCK server: interactive docking prediction of protein-protein complexes and symmetric multimers

(2014) B. G. Pierce et al.   BIOINFORMATICS

Plasmodium falciparum parasites lacking histidine-rich protein 2 and 3: a review and recommendations for accurate reporting

(2014) Qin Cheng et al.   MALARIA JOURNAL

Cationic Surfactant-Based Colorimetric Detection of Plasmodium Lactate Dehydrogenase, a Biomarker for Malaria, Using the Specific DNA Aptamer

(2014) Seonghwan Lee et al.   PLoS One

Potential Biomarkers and Their Applications for Rapid and Reliable Detection of Malaria

(2014) Priyamvada Jain et al.   Biomed Research International

Genome-wide regulatory dynamics of translation in the Plasmodium falciparum asexual blood stages

(2014) Florence Caro et al.   eLife

Structural basis for discriminatory recognition of Plasmodium lactate dehydrogenase by a DNA aptamer

(2013) Y.-W. Cheung et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biomarker Discovery by Sparse Canonical Correlation Analysis of Complex Clinical Phenotypes of Tuberculosis and Malaria

(2013) Juho Rousu et al.   PLoS Computational Biology

Ribosome profiling: a Hi-Def monitor for protein synthesis at the genome-wide scale

(2013) Audrey M. Michel et al.   Wiley Interdisciplinary Reviews-RNA

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Automated 3D structure composition for large RNAs

(2012) Mariusz Popenda et al.   NUCLEIC ACIDS RESEARCH

Development of a Novel Fluorophore for Real-Time Biomonitoring System

(2012) Hyun-Ok Song et al.   PLoS One

Aptamers and the next generation of diagnostic reagents

(2012) Varatharasa Thiviyanathan et al.   Proteomics Clinical Applications

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Diversity visualization by endonuclease: A rapid assay to monitor diverse nucleotide libraries

(2010) Theam Soon Lim et al.   ANALYTICAL BIOCHEMISTRY

New insights into the blood-stage transcriptome ofPlasmodium falciparumusing RNA-Seq

(2010) Thomas D. Otto et al.   MOLECULAR MICROBIOLOGY

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling

(2009) N. T. Ingolia et al.   SCIENCE

Kinetic Checkpoint at a Late Step in Translation Initiation

(2008) Pohl Milon et al.   MOLECULAR CELL

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(2008) John Klune et al.   MOLECULAR MEDICINE

PlasmoDB: a functional genomic database for malaria parasites

(2008) C. Aurrecoechea et al.   NUCLEIC ACIDS RESEARCH

The transcriptome of Plasmodium vivax reveals divergence and diversity of transcriptional regulation in malaria parasites

(2008) Z. Bozdech et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High mobility group box (HMGB) proteins of Plasmodium falciparum: DNA binding proteins with pro-inflammatory activity

(2007) Krishan Kumar et al.   PARASITOLOGY INTERNATIONAL