Modulation of Antimicrobial Peptide Potency in Stressed Lipid Bilayers

A New Computational Method for Membrane Compressibility: Bilayer Mechanical Thickness Revisited

(2019) Milka Doktorova et al.   BIOPHYSICAL JOURNAL

Binding, folding and insertion of a β-hairpin peptide at a lipid bilayer surface: Influence of electrostatics and lipid tail packing

(2018) Keon A. Reid et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Cooperative Modes of Action of Antimicrobial Peptides Characterized with Atomistic Simulations: A Study on Cecropin B

(2018) Ya-Wen Hsiao et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Metastable Prepores in Tension-Free Lipid Bilayers

(2018) Christina L. Ting et al.   PHYSICAL REVIEW LETTERS

Discovery of cationic nonribosomal peptides as Gram-negative antibiotics through global genome mining

(2018) Yong-Xin Li et al.   Nature Communications

Tuneable poration: host defense peptides as sequence probes for antimicrobial mechanisms

(2018) Marc-Philipp Pfeil et al.   Scientific Reports

Tension-activated channels in the mechanism of osmotic fitness in Pseudomonas aeruginosa

(2017) Uğur Çetiner et al.   JOURNAL OF GENERAL PHYSIOLOGY

All-Atom Molecular Dynamics-Based Analysis of Membrane-Stabilizing Copolymer Interactions with Lipid Bilayers Probed under Constant Surface Tensions

(2017) Evelyne M. Houang et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Mechanical forces direct stem cell behaviour in development and regeneration

(2017) Kyle H. Vining et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

FATSLiM: a fast and robust software to analyze MD simulations of membranes

(2016) Sébastien Buchoux   BIOINFORMATICS

Antimicrobial Peptides Share a Common Interaction Driven by Membrane Line Tension Reduction

(2016) J. Michael Henderson et al.   BIOPHYSICAL JOURNAL

Multistep Molecular Dynamics Simulations Identify the Highly Cooperative Activity of Melittin in Recognizing and Stabilizing Membrane Pores

(2015) Delin Sun et al.   LANGMUIR

Mechanically Activated Ion Channels

(2015) Sanjeev S. Ranade et al.   NEURON

Molecular dynamics simulations of lipid membranes with lateral force: Rupture and dynamic properties

(2014) Jun Yu Xie et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

MEMBPLUGIN: studying membrane complexity in VMD

(2014) Ramon Guixà-González et al.   BIOINFORMATICS

Physical Properties of Escherichia coli Spheroplast Membranes

(2014) Yen Sun et al.   BIOPHYSICAL JOURNAL

Theoretical Insight into the Relationship between the Structures of Antimicrobial Peptides and Their Actions on Bacterial Membranes

(2014) Licui Chen et al.   JOURNAL OF PHYSICAL CHEMISTRY B

MscL: channeling membrane tension

(2014) Troy A. Walton et al.   PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY

Mechanosensitive Channel Activation by Diffusio-Osmotic Force

(2014) Douwe Jan Bonthuis et al.   PHYSICAL REVIEW LETTERS

Active transport of vesicles in neurons is modulated by mechanical tension

(2014) Wylie W. Ahmed et al.   Scientific Reports

Molecular Dynamics Simulation Analysis of Membrane Defects and Pore Propensity of Hemifusion Diaphragms

(2013) Manami Nishizawa et al.   BIOPHYSICAL JOURNAL

Stiffened lipid platforms at molecular force foci

(2013) A. Anishkin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nanoscale imaging reveals laterally expanding antimicrobial pores in lipid bilayers

(2013) P. D. Rakowska et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Strength Under Tension

(2013) R. Bainer et al.   SCIENCE

Molecular structures of fluid phase phosphatidylglycerol bilayers as determined by small angle neutron and X-ray scattering

(2012) Jianjun Pan et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Effect of membrane tension on the physical properties of DOPC lipid bilayer membrane

(2012) A. Srinivas Reddy et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Use the force: membrane tension as an organizer of cell shape and motility

(2012) Alba Diz-Muñoz et al.   TRENDS IN CELL BIOLOGY

Fluid phase lipid areas and bilayer thicknesses of commonly used phosphatidylcholines as a function of temperature

(2011) Norbert Kučerka et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Minimum Energy Path to Membrane Pore Formation and Rupture

(2011) Christina L. Ting et al.   PHYSICAL REVIEW LETTERS

Molecular dynamics simulations of rupture in lipid bilayers

(2010) Michael D Tomasini et al.   EXPERIMENTAL BIOLOGY AND MEDICINE

Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types

(2010) Jeffery B. Klauda et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Measuring mechanical tension across vinculin reveals regulation of focal adhesion dynamics

(2010) Carsten Grashoff et al.   NATURE

Exploring Multidimensional Free Energy Landscapes Using Time-Dependent Biases on Collective Variables

(2009) Jérome Hénin et al.   Journal of Chemical Theory and Computation

Lipid domains in bacterial membranes and the action of antimicrobial agents

(2008) Richard M. Epand et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

CHARMM-GUI: A web-based graphical user interface for CHARMM

(2008) Sunhwan Jo et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY