Phytobiome metabolism: beneficial soil microbes steer crop plants' secondary metabolism

Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

(2018) Wenshu Kang et al.   BMC PLANT BIOLOGY

Arbuscular Mycorrhizal Fungi and Plant Chemical Defence: Effects of Colonisation on Aboveground and Belowground Metabolomes

(2018) Elizabeth M. Hill et al.   JOURNAL OF CHEMICAL ECOLOGY

Modulation of plant chemistry by beneficial root microbiota

(2018) Desalegn W. Etalo et al.   NATURAL PRODUCT REPORTS

Root metabolic plasticity underlies functional diversity in mycorrhiza-enhanced stress tolerance in tomato

(2018) Javier Rivero et al.   NEW PHYTOLOGIST

Omics for understanding the mechanisms of Streptomyces lydicus A01 promoting the growth of tomato seedlings

(2018) Qiong Wu et al.   PLANT AND SOIL

Genetic mapping identifies loci that influence tomato resistance against Colorado potato beetles

(2018) Erandi Vargas-Ortiz et al.   Scientific Reports

Small molecules below-ground: the role of specialized metabolites in the rhizosphere

(2017) Hassan Massalha et al.   PLANT JOURNAL

Plant secondary metabolites: a key driver of litter decomposition and soil nutrient cycling

(2016) Mathilde Chomel et al.   JOURNAL OF ECOLOGY

Enhancement of drought stress tolerance in crops by plant growth promoting rhizobacteria

(2016) Sai Shiva Krishna Prasad Vurukonda et al.   MICROBIOLOGICAL RESEARCH

The Arabidopsis leaf transcriptome reveals distinct but also overlapping responses to colonization by phyllosphere commensals and pathogen infection with impact on plant health

(2016) Christine Vogel et al.   NEW PHYTOLOGIST

Phenols enhancement effect of microbial consortium in pea plants restrains Sclerotinia sclerotiorum

(2015) Akansha Jain et al.   BIOLOGICAL CONTROL

Leaf metabolome in arbuscular mycorrhizal symbiosis

(2015) Rabea Schweiger et al.   CURRENT OPINION IN PLANT BIOLOGY

Role of root microbiota in plant productivity

(2015) A. Tkacz et al.   JOURNAL OF EXPERIMENTAL BOTANY

Functional overlap of the Arabidopsis leaf and root microbiota

(2015) Yang Bai et al.   NATURE

Grapevine colonization by endophytic bacteria shifts secondary metabolism and suggests activation of defense pathways

(2015) Sebastiàn Lòpez-Fernàndez et al.   PLANT AND SOIL

The Roles of ROS and ABA in Systemic Acquired Acclimation

(2015) Ron Mittler et al.   PLANT CELL

New aspect of plant–rhizobia interaction: Alkaloid biosynthesis inCrotalariadepends on nodulation

(2015) Simon Irmer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rethinking heritability of the microbiome

(2015) Edward J. van Opstal et al.   SCIENCE

Complementarity among plant growth promoting traits in rhizospheric bacterial communities promotes plant growth

(2015) Mangal Singh et al.   Scientific Reports

Exploring Jasmonates in the Hormonal Network of Drought and Salinity Responses

(2015) Michael Riemann et al.   Frontiers in Plant Science

The microbiome of uncontacted Amerindians

(2015) J. C. Clemente et al.   Science Advances

Induced Systemic Resistance by Beneficial Microbes

(2014) Corné M.J. Pieterse et al.   Annual Review of Phytopathology

Transkingdom Control of Microbiota Diurnal Oscillations Promotes Metabolic Homeostasis

(2014) Christoph A. Thaiss et al.   CELL

ABA-dependent and ABA-independent signaling in response to osmotic stress in plants

(2014) Takuya Yoshida et al.   CURRENT OPINION IN PLANT BIOLOGY

Biotic interactions and temporal dynamics of the human gastrointestinal microbiota

(2014) Pål Trosvik et al.   ISME Journal

Deciphering the Role of Phytoalexins in Plant-Microorganism Interactions and Human Health

(2014) Philippe Jeandet et al.   MOLECULES

The role of isoflavone metabolism in plant protection depends on the rhizobacterial MAMP that triggers systemic resistance against Xanthomonas axonopodis pv. glycines in Glycine max (L.) Merr. cv. Osumi

(2014) Elena Algar et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Drought-Tolerance of Wheat Improved by Rhizosphere Bacteria from Harsh Environments: Enhanced Biomass Production and Reduced Emissions of Stress Volatiles

(2014) Salme Timmusk et al.   PLoS One

High specificity in plant leaf metabolic responses to arbuscular mycorrhiza

(2014) Rabea Schweiger et al.   Nature Communications

High-fat maternal diet during pregnancy persistently alters the offspring microbiome in a primate model

(2014) Jun Ma et al.   Nature Communications

Niche and host-associated functional signatures of the root surface microbiome

(2014) Maya Ofek-Lalzar et al.   Nature Communications

Amino acids in the rhizosphere: From plants to microbes

(2013) Luke A. Moe   AMERICAN JOURNAL OF BOTANY

A Dual Role of Strigolactones in Phosphate Acquisition and Utilization in Plants

(2013) Olaf Czarnecki et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Exploring the bovine rumen bacterial community from birth to adulthood

(2013) Elie Jami et al.   ISME Journal

Translating the human microbiome

(2013) James Brown et al.   NATURE BIOTECHNOLOGY

Biosynthesis of Antinutritional Alkaloids in Solanaceous Crops Is Mediated by Clustered Genes

(2013) M. Itkin et al.   SCIENCE

Gut–brain axis: how the microbiome influences anxiety and depression

(2013) Jane A. Foster et al.   TRENDS IN NEUROSCIENCES

The alligator gut microbiome and implications for archosaur symbioses

(2013) Sarah W. Keenan et al.   Scientific Reports

A Guide to Enterotypes across the Human Body: Meta-Analysis of Microbial Community Structures in Human Microbiome Datasets

(2013) Omry Koren et al.   PLoS Computational Biology

Induced plant responses to microbes and insects

(2013) Corné M. J. Pieterse et al.   Frontiers in Plant Science

Plant growth-promoting rhizobacteria and root system functioning

(2013) Jordan Vacheron et al.   Frontiers in Plant Science

Comparison of prominent Azospirillum strains in Azospirillum–Pseudomonas–Glomus consortia for promotion of maize growth

(2012) Olivier Couillerot et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

Plant secondary metabolite profiling evidences strain-dependent effect in the Azospirillum–Oryza sativa association

(2012) Amel Chamam et al.   PHYTOCHEMISTRY

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

The potential contribution of plant growth-promoting bacteria to reduce environmental degradation – A comprehensive evaluation

(2011) Luz E. de-Bashan et al.   APPLIED SOIL ECOLOGY

NLRP6 Inflammasome Regulates Colonic Microbial Ecology and Risk for Colitis

(2011) Eran Elinav et al.   CELL

A specialist root herbivore exploits defensive metabolites to locate nutritious tissues

(2011) Christelle A. M. Robert et al.   ECOLOGY LETTERS

Bioactivities of Glycoalkaloids and Their Aglycones from Solanum Species

(2011) Sinead Eileen Milner et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Variation of secondary metabolite levels in maize seedling roots induced by inoculation with Azospirillum, Pseudomonas and Glomus consortium under field conditions

(2011) Vincent Walker et al.   PLANT AND SOIL

Benzoxazinoid Metabolites Regulate Innate Immunity against Aphids and Fungi in Maize

(2011) Shakoor Ahmad et al.   PLANT PHYSIOLOGY

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Moving pictures of the human microbiome

(2011) J Gregory Caporaso et al.   GENOME BIOLOGY

Plant growth promoting rhizobacteria and endophytes accelerate phytoremediation of metalliferous soils

(2010) Y. Ma et al.   BIOTECHNOLOGY ADVANCES

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Host plant secondary metabolite profiling shows a complex, strain-dependent response of maize to plant growth-promoting rhizobacteria of the genus Azospirillum

(2010) Vincent Walker et al.   NEW PHYTOLOGIST

Plant-Growth-Promoting Rhizobacteria

(2009) Ben Lugtenberg et al.   Annual Review of Microbiology

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Soil Bacteria Elevate Essential Oil Accumulation and Emissions in Sweet Basil

(2009) Erika Banchio et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Systemic Induction of Monoterpene Biosynthesis inOriganum×majoricumby Soil Bacteria

(2009) Erika Banchio et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Effect of the presence of the plant growth promoting rhizobacterium (PGPR) Chryseobacterium balustinum Aur9 and salt stress in the pattern of flavonoids exuded by soybean roots

(2009) Marta S. Dardanelli et al.   PLANT AND SOIL

Exploiting plant–microbe partnerships to improve biomass production and remediation

(2009) Nele Weyens et al.   TRENDS IN BIOTECHNOLOGY

The microbial community of Vetiver root and its involvement into essential oil biogenesis

(2008) Luigi Del Giudice et al.   ENVIRONMENTAL MICROBIOLOGY

Rhizosphere bacteria help plants tolerate abiotic stress

(2008) Jungwook Yang et al.   TRENDS IN PLANT SCIENCE