Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits
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Title
Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits
Authors
Keywords
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Journal
NATURE GENETICS
Volume 51, Issue 5, Pages 857-864
Publisher
Springer Science and Business Media LLC
Online
2019-04-30
DOI
10.1038/s41588-019-0401-3
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Note: Only part of the references are listed.- Ecology and genomics of an important crop wild relative as a prelude to agricultural innovation
- (2018) Eric J.B. von Wettberg et al. Nature Communications
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- (2017) Rajeev K Varshney et al. NATURE GENETICS
- A study of allelic diversity underlying flowering-time adaptation in maize landraces
- (2017) J Alberto Romero Navarro et al. NATURE GENETICS
- Decomposing the Site Frequency Spectrum: The Impact of Tree Topology on Neutrality Tests
- (2017) Luca Ferretti et al. GENETICS
- Rapid breeding and varietal replacement are critical to adaptation of cropping systems in the developing world to climate change
- (2017) Gary N. Atlin et al. Global Food Security-Agriculture Policy Economics and Environment
- Multiple post-domestication origins ofkabulichickpea through allelic variation in a diversification-associated transcription factor
- (2016) R. Varma Penmetsa et al. NEW PHYTOLOGIST
- GAPIT Version 2: An Enhanced Integrated Tool for Genomic Association and Prediction
- (2016) You Tang et al. Plant Genome
- Iterative Usage of Fixed and Random Effect Models for Powerful and Efficient Genome-Wide Association Studies
- (2016) Xiaolei Liu et al. PLoS Genetics
- Recent breeding programs enhanced genetic diversity in both desi and kabuli varieties of chickpea (Cicer arietinum L.)
- (2016) Mahendar Thudi et al. Scientific Reports
- Vernalization response in chickpea is controlled by a major QTL
- (2015) Srinivasan Samineni et al. EUPHYTICA
- Can the Site-Frequency Spectrum Distinguish Exponential Population Growth from Multiple-Merger Coalescents?
- (2015) B. Eldon et al. GENETICS
- Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean
- (2015) Zhengkui Zhou et al. NATURE BIOTECHNOLOGY
- ANGSD: Analysis of Next Generation Sequencing Data
- (2014) Thorfinn Sand Korneliussen et al. BMC BIOINFORMATICS
- The effect ofVRN1genes on important agronomic traits in high-yielding Canadian soft white spring wheat
- (2014) Atif Kamran et al. PLANT BREEDING
- Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches
- (2014) Mahendar Thudi et al. PLoS One
- Exploring Germplasm Diversity to Understand the Domestication Process in Cicer spp. Using SNP and DArT Markers
- (2014) Manish Roorkiwal et al. PLoS One
- The 3,000 rice genomes project
- (2014) GigaScience
- Steep, cheap and deep: an ideotype to optimize water and N acquisition by maize root systems
- (2013) Jonathan P. Lynch ANNALS OF BOTANY
- Traits of relevance to improve yield under terminal drought stress in chickpea (C. arietinum L.)
- (2013) J. Kashiwagi et al. FIELD CROPS RESEARCH
- Feeding the future
- (2013) Susan McCouch et al. NATURE
- Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement
- (2013) Rajeev K Varshney et al. NATURE BIOTECHNOLOGY
- Genetic dissection of drought tolerance in chickpea (Cicer arietinum L.)
- (2013) Rajeev K. Varshney et al. THEORETICAL AND APPLIED GENETICS
- Whole-genome sequencing reveals untapped genetic potential in Africa’s indigenous cereal crop sorghum
- (2013) Emma S. Mace et al. Nature Communications
- GAPIT: genome association and prediction integrated tool
- (2012) Alexander E. Lipka et al. BIOINFORMATICS
- SOAPindel: Efficient identification of indels from short paired reads
- (2012) S. Li et al. GENOME RESEARCH
- Climate change and evolutionary adaptation
- (2011) Ary A. Hoffmann et al. NATURE
- Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes
- (2011) Xun Xu et al. NATURE BIOTECHNOLOGY
- Genomic tools and germplasm diversity for chickpea improvement
- (2011) Hari D. Upadhyaya et al. Plant Genetic Resources-Characterization and Utilization
- Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula
- (2011) A. Branca et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Association genetics in crop improvement
- (2010) J Antoni Rafalski CURRENT OPINION IN PLANT BIOLOGY
- Mixed linear model approach adapted for genome-wide association studies
- (2010) Zhiwu Zhang et al. NATURE GENETICS
- Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection
- (2010) Hon-Ming Lam et al. NATURE GENETICS
- Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude
- (2010) X. Yi et al. SCIENCE
- SOAP2: an improved ultrafast tool for short read alignment
- (2009) R. Li et al. BIOINFORMATICS
- A First-Generation Haplotype Map of Maize
- (2009) M. A. Gore et al. SCIENCE
- Next-generation sequencing technologies and their implications for crop genetics and breeding
- (2009) Rajeev K. Varshney et al. TRENDS IN BIOTECHNOLOGY
- Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.)
- (2008) Hari D Upadhyaya et al. BMC PLANT BIOLOGY
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