Predictive genomic traits for bacterial growth in culture versus actual growth in soil
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Predictive genomic traits for bacterial growth in culture versus actual growth in soil
Authors
Keywords
-
Journal
ISME Journal
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-05-03
DOI
10.1038/s41396-019-0422-z
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- On the intrinsic constraint of bacterial growth rate: M. tuberculosis’s view of the protein translation capacity
- (2018) Manlu Zhu et al. CRITICAL REVIEWS IN MICROBIOLOGY
- Taxonomic patterns in the nitrogen assimilation of soil prokaryotes
- (2018) Ember M. Morrissey et al. ENVIRONMENTAL MICROBIOLOGY
- Consistent changes in the taxonomic structure and functional attributes of bacterial communities during primary succession
- (2018) Rüdiger Ortiz-Álvarez et al. ISME Journal
- Trait-based patterns of microbial dynamics in dormancy potential and heterotrophic strategy: case studies of resource-based and post-press succession
- (2018) Patrick J. Kearns et al. ISME Journal
- Estimating taxon-specific population dynamics in diverse microbial communities
- (2018) Benjamin J. Koch et al. Ecosphere
- Correcting for 16S rRNA gene copy numbers in microbiome surveys remains an unsolved problem
- (2018) Stilianos Louca et al. Microbiome
- A coexistence theory in microbial communities
- (2018) Marina Dohi et al. Royal Society Open Science
- Ecological selection for small microbial genomes along a temperate-to-thermal soil gradient
- (2018) Jackson W. Sorensen et al. Nature Microbiology
- Microbial functional trait of rRNA operon copy numbers increases with organic levels in anaerobic digesters
- (2017) Linwei Wu et al. ISME Journal
- Bacterial carbon use plasticity, phylogenetic diversity and the priming of soil organic matter
- (2017) Ember M Morrissey et al. ISME Journal
- Embracing the unknown: disentangling the complexities of the soil microbiome
- (2017) Noah Fierer NATURE REVIEWS MICROBIOLOGY
- Ecological strategies and metabolic trade-offs of complex environmental biofilms
- (2017) Robert Niederdorfer et al. npj Biofilms and Microbiomes
- Phylogenetic organization of bacterial activity
- (2016) Ember M Morrissey et al. ISME Journal
- Resource-dependent attenuation of species interactions during bacterial succession
- (2016) Damian W Rivett et al. ISME Journal
- Identification of growing bacteria during litter decomposition in freshwater through H218O quantitative stable isotope probing
- (2016) Michaela Hayer et al. Environmental Microbiology Reports
- Exploiting rRNA operon copy number to investigate bacterial reproductive strategies
- (2016) Benjamin R. K. Roller et al. Nature Microbiology
- Quantitative Microbial Ecology through Stable Isotope Probing
- (2015) Bruce A. Hungate et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Decreases in average bacterial community rRNA operon copy number during succession
- (2015) Diana R Nemergut et al. ISME Journal
- Growth rates and rRNA content of four marine bacteria in pure cultures and in the Delaware estuary
- (2015) Thomas S Lankiewicz et al. ISME Journal
- The ecology of the microbiome: Networks, competition, and stability
- (2015) K. Z. Coyte et al. SCIENCE
- Emergence of robust growth laws from optimal regulation of ribosome synthesis
- (2014) M. Scott et al. Molecular Systems Biology
- Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences
- (2014) Pablo Yarza et al. NATURE REVIEWS MICROBIOLOGY
- rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development
- (2014) Steven F. Stoddard et al. NUCLEIC ACIDS RESEARCH
- Genome reduction as the dominant mode of evolution
- (2013) Yuri I. Wolf et al. BIOESSAYS
- Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses
- (2013) Steven J Blazewicz et al. ISME Journal
- Conceptualizing functional traits and ecological characteristics of methane-oxidizing bacteria as life strategies
- (2012) Adrian Ho et al. Environmental Microbiology Reports
- Repeated, Selection-Driven Genome Reduction of Accessory Genes in Experimental Populations
- (2012) Ming-Chun Lee et al. PLoS Genetics
- Responses of Ecosystem Carbon Cycling to Climate Change Treatments Along an Elevation Gradient
- (2011) Zhuoting Wu et al. ECOSYSTEMS
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
- (2010) J. G. Caporaso et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Systemic Imprint of Growth and Its Uses in Ecological (Meta)Genomics
- (2010) Sara Vieira-Silva et al. PLoS Genetics
- Bacterial competition: surviving and thriving in the microbial jungle
- (2009) Michael E. Hibbing et al. NATURE REVIEWS MICROBIOLOGY
- Genome streamlining and the elemental costs of growth
- (2009) Dag O. Hessen et al. TRENDS IN ECOLOGY & EVOLUTION
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now