Phosphate‐limited ocean regions select for bacterial populations enriched in the carbon–phosphorus lyase pathway for phosphonate degradation

Phosphate insensitive aminophosphonate mineralisation within oceanic nutrient cycles

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The reconstruction of 2,631 draft metagenome-assembled genomes from the global oceans

(2018) Benjamin J. Tully et al.   Scientific Data

Understanding the unique biogeochemistry of the Mediterranean Sea: Insights from a coupled phosphorus and nitrogen model

(2017) Helen R. Powley et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Isolation and Characterization of Bacteria That Degrade Phosphonates in Marine Dissolved Organic Matter

(2017) Oscar A. Sosa et al.   Frontiers in Microbiology

Environmental drivers of a microbial genomic transition zone in the ocean’s interior

(2017) Daniel R. Mende et al.   Nature Microbiology

Marine methane paradox explained by bacterial degradation of dissolved organic matter

(2016) Daniel J. Repeta et al.   Nature Geoscience

Lipid remodelling is a widespread strategy in marine heterotrophic bacteria upon phosphorus deficiency

(2015) Marta Sebastián et al.   ISME Journal

Structural insights into the bacterial carbon–phosphorus lyase machinery

(2015) Paulina Seweryn et al.   NATURE

eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences

(2015) Jaime Huerta-Cepas et al.   NUCLEIC ACIDS RESEARCH

SAR11 lipid renovation in response to phosphate starvation

(2015) Paul Carini et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure and function of the global ocean microbiome

(2015) S. Sunagawa et al.   SCIENCE

Aerobic production of methane from dissolved water-column methylphosphonate and sinking particles in the North Pacific Subtropical Gyre

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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Evolutionary origin of a streamlined marine bacterioplankton lineage

(2014) Haiwei Luo   ISME Journal

Methane production by phosphate-starved SAR11 chemoheterotrophic marine bacteria

(2014) Paul Carini et al.   Nature Communications

Extrachromosomal, extraordinary and essential—the plasmids of the Roseobacter clade

(2013) Jörn Petersen et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Revisiting N2 fixation in the North Atlantic Ocean: Significance of deviations from the Redfield Ratio, atmospheric deposition and climate variability

(2013) Arvind Singh et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

The catalytic mechanism for aerobic formation of methane by bacteria

(2013) Siddhesh S. Kamat et al.   NATURE

Processes and patterns of oceanic nutrient limitation

(2013) C. M. Moore et al.   Nature Geoscience

Metagenomic species profiling using universal phylogenetic marker genes

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Metagenomics uncovers a new group of low GC and ultra-small marine Actinobacteria

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Enzymatic Activities and Prokaryotic Abundance in Relation to Organic Matter along a West–East Mediterranean Transect (TRANSMED Cruise)

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Fast gapped-read alignment with Bowtie 2

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The genes and enzymes of phosphonate metabolism by bacteria, and their distribution in the marine environment

(2012) Juan F. Villarreal-Chiu   Frontiers in Microbiology

Thalassospira sp. Isolated from the Oligotrophic Eastern Mediterranean Sea Exhibits Chemotaxis toward Inorganic Phosphate during Starvation

(2011) Annemarie Hütz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

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Marine Dissolved Organic Phosphorus Composition: Insights from Samples Recovered Using Combined Electrodialysis/Reverse Osmosis

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Depth distributions of alkaline phosphatase and phosphonate utilization genes in the North Pacific Subtropical Gyre

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Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

Prevalence of a calcium-based alkaline phosphatase associated with the marine cyanobacterium Prochlorococcus and other ocean bacteria

(2010) Satish Kathuria et al.   ENVIRONMENTAL MICROBIOLOGY

Complete Genome Sequence of "Candidatus Puniceispirillum marinum" IMCC1322, a Representative of the SAR116 Clade in the Alphaproteobacteria

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Ecosystem-specific selection pressures revealed through comparative population genomics

(2010) M. L. Coleman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Why is the Eastern Mediterranean phosphorus limited?

(2010) M.D. Krom et al.   PROGRESS IN OCEANOGRAPHY

Genome organisation of the marine Roseobacter clade member Marinovum algicola

(2009) Silke Pradella et al.   ARCHIVES OF MICROBIOLOGY

Widespread known and novel phosphonate utilization pathways in marine bacteria revealed by functional screening and metagenomic analyses

(2009) Asuncion Martinez et al.   ENVIRONMENTAL MICROBIOLOGY

Distribution of dissolved organic nutrients and their effect on export production over the Atlantic Ocean

(2009) S. Torres-Valdés et al.   GLOBAL BIOGEOCHEMICAL CYCLES

The alkaline phosphatase PhoX is more widely distributed in marine bacteria than the classical PhoA

(2009) Marta Sebastian et al.   ISME Journal

Microbial community genomics in eastern Mediterranean Sea surface waters

(2009) Roi Feingersch et al.   ISME Journal

Phytoplankton in the ocean use non-phosphorus lipids in response to phosphorus scarcity

(2009) Benjamin A. S. Van Mooy et al.   NATURE

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

Aerobic production of methane in the sea

(2008) David M. Karl et al.   Nature Geoscience