Transcriptomic comparison between developing seeds of yellow- and black-seeded Brassica napus reveals that genes influence seed quality
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Transcriptomic comparison between developing seeds of yellow- and black-seeded Brassica napus reveals that genes influence seed quality
Authors
Keywords
-
Journal
BMC PLANT BIOLOGY
Volume 19, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-05-16
DOI
10.1186/s12870-019-1821-z
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Lignins: Biosynthesis and Biological Functions in Plants
- (2018) Qingquan Liu et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Transcriptome Analysis Reveals genes involved in flavonoid biosynthesis and accumulation in Dendrobium catenatum From Different Locations
- (2018) Zhouxi Lei et al. Scientific Reports
- Correlation Analysis of Phenolic Contents and Antioxidation in Yellow- and Black-Seeded Brassica napus
- (2018) Yue Wang et al. MOLECULES
- Identification and characterization of SSR, SNP and InDel molecular markers from RNA-Seq data of guar (Cyamopsis tetragonoloba, L. Taub.) roots
- (2018) Omika Thakur et al. BMC GENOMICS
- Global dissection of alternative splicing uncovers transcriptional diversity in tissues and associates with the flavonoid pathway in tea plant (Camellia sinensis)
- (2018) Junyan Zhu et al. BMC PLANT BIOLOGY
- PacBio full-length cDNA sequencing integrated with RNA-seq reads drastically improves the discovery of splicing transcripts in rice
- (2018) Guoqiang Zhang et al. PLANT JOURNAL
- Genome-Wide Association Mapping of Seed Coat Color in Brassica napus
- (2017) Jia Wang et al. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
- A genome-wide survey with different rapeseed ecotypes uncovers footprints of domestication and breeding
- (2017) Dayong Wei et al. JOURNAL OF EXPERIMENTAL BOTANY
- Silencing of BnTT1 family genes affects seed flavonoid biosynthesis and alters seed fatty acid composition in Brassica napus
- (2017) Jianping Lian et al. PLANT SCIENCE
- Transcriptomic Analysis of Seed Coats in Yellow-Seeded Brassica napus Reveals Novel Genes That Influence Proanthocyanidin Biosynthesis
- (2017) Meiyan Hong et al. Frontiers in Plant Science
- Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element
- (2017) Ji-Hee Min et al. Frontiers in Plant Science
- Comparison of DNA methylation in the developing seeds of yellow- and black-seeded Brassica napus through MSAP analysis
- (2016) Y. Wang et al. EUPHYTICA
- Metabolic Characteristics in Meal of Black Rapeseed and Yellow-Seeded Progeny of Brassica napus–Sinapis alba Hybrids
- (2015) Jinjin Jiang et al. MOLECULES
- Completion of Tricin Biosynthesis Pathway in Rice: Cytochrome P450 75B4 Is a Unique Chrysoeriol 5′-Hydroxylase
- (2015) Pui Ying Lam et al. PLANT PHYSIOLOGY
- Cytochrome P450 93G1 Is a Flavone Synthase II That Channels Flavanones to the Biosynthesis of Tricin O-Linked Conjugates in Rice
- (2014) P. Y. Lam et al. PLANT PHYSIOLOGY
- Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection
- (2014) Ingo Appelhagen et al. PLANTA
- Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome
- (2014) B. Chalhoub et al. SCIENCE
- Chalcone synthase family genes have redundant roles in anthocyanin biosynthesis and in response to blue/UV-A light in turnip (Brassica rapa ; Brassicaceae)
- (2013) Bo Zhou et al. AMERICAN JOURNAL OF BOTANY
- Molecular mechanism of manipulating seed coat coloration in oilseed Brassica species
- (2013) Cheng-Yu Yu JOURNAL OF APPLIED GENETICS
- Differential accumulation of phenolic compounds and expression of related genes in black- and yellow-seeded Brassica napus
- (2013) Cunmin Qu et al. JOURNAL OF EXPERIMENTAL BOTANY
- Phenolic Composition Analysis and Gene Expression in Developing Seeds of Yellow- and Black-seededBrassica napus
- (2013) Jinjin Jiang et al. Journal of Integrative Plant Biology
- Genome-wide identification and expression analyses of cytochromeP450genes in mulberry (Morus notabilis)
- (2013) Bi Ma et al. Journal of Integrative Plant Biology
- UDP-Glucose Pyrophosphorylase Is a Novel Plant Cell Death Regulator
- (2013) Stephen Chivasa et al. JOURNAL OF PROTEOME RESEARCH
- Complexity and robustness of the flavonoid transcriptional regulatory network revealed by comprehensive analyses of MYB-bHLH-WDR complexes and their targets in Arabidopsis seed
- (2013) Wenjia Xu et al. NEW PHYTOLOGIST
- Dissection of a major QTL for seed colour and fibre content inBrassica napusreveals colocalization with candidate genes for phenylpropanoid biosynthesis and flavonoid deposition
- (2013) Anna Stein et al. PLANT BREEDING
- TCP3 interacts with R2R3-MYB proteins, promotes flavonoid biosynthesis and negatively regulates the auxin response inArabidopsis thaliana
- (2013) Shutian Li et al. PLANT JOURNAL
- Reprogramming the Phenylpropanoid Metabolism in Seeds of Oilseed Rape by Suppressing the Orthologs of REDUCED EPIDERMAL FLUORESCENCE1
- (2013) J. Mittasch et al. PLANT PHYSIOLOGY
- New insights into the regulation of anthocyanin biosynthesis in fruits
- (2013) Laura Jaakola TRENDS IN PLANT SCIENCE
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- Construction of genetic linkage map and mapping of QTL for seed color in Brassica rapa
- (2012) Berisso Kebede et al. GENOME
- New NIRS Calibrations for Fiber Fractions Reveal Broad Genetic Variation in Brassica napus Seed Quality
- (2012) Benjamin Wittkop et al. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
- FT-IR and NMR study of seed coat dissected from different colored progenies ofBrassica napus-Sinapis albahybrids
- (2012) Jinjin Jiang et al. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE
- A knockout mutation in the lignin biosynthesis gene CCR1 explains a major QTL for acid detergent lignin content in Brassica napus seeds
- (2012) Liezhao Liu et al. THEORETICAL AND APPLIED GENETICS
- Characterization of interploid hybrids from crosses between Brassica juncea and B. oleracea and the production of yellow-seeded B. napus
- (2012) Jing Wen et al. THEORETICAL AND APPLIED GENETICS
- Rapeseed breeding for oil content, quality, and sustainability
- (2011) Amine Abbadi et al. EUROPEAN JOURNAL OF LIPID SCIENCE AND TECHNOLOGY
- Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB–BHLH–TTG1 transcription factor complexes
- (2011) Ingo Appelhagen et al. GENE
- Synthetic spike-in standards for RNA-seq experiments
- (2011) L. Jiang et al. GENOME RESEARCH
- Molecular cloning and characterization of twoBrassica napus TTG1 genes reveal genus-specific nucleotide preference, extreme protein-level conservation and fast divergence of organ-specificity
- (2010) Jun Lu et al. Genes & Genomics
- Molecular and cytological characterization of introgression lines in yellow seed derived from somatic hybrids between Brassica napus and Sinapis alba
- (2010) Aimin Li et al. MOLECULAR BREEDING
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- ANKYRIN REPEAT-CONTAINING PROTEIN 2A Is an Essential Molecular Chaperone for Peroxisomal Membrane-Bound ASCORBATE PEROXIDASE3 in Arabidopsis
- (2010) G. Shen et al. PLANT CELL
- Gene ontology analysis for RNA-seq: accounting for selection bias
- (2010) Matthew D Young et al. GENOME BIOLOGY
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- Phenotypic variation in progenies from somatic hybrids between Brassica napus and Sinapis alba
- (2009) Aimin Li et al. EUPHYTICA
- A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize
- (2009) BJÖRN USADEL et al. PLANT CELL AND ENVIRONMENT
- Intertribal somatic hybrids between Brassica napus and Camelina sativa with high linolenic acid content
- (2009) J. J. Jiang et al. PLANT CELL TISSUE AND ORGAN CULTURE
- Analysis of Metabolic Flux Phenotypes for Two Arabidopsis Mutants with Severe Impairment in Seed Storage Lipid Synthesis
- (2009) J. Lonien et al. PLANT PHYSIOLOGY
- Brassica orthologs from BANYULS belong to a small multigene family, which is involved in procyanidin accumulation in the seed
- (2009) Bathilde Auger et al. PLANTA
- TRANSPARENT TESTA 12 genes from Brassica napus and parental species: cloning, evolution, and differential involvement in yellow seed trait
- (2008) You-Rong Chai et al. MOLECULAR GENETICS AND GENOMICS
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started