Collembola interact with mycorrhizal fungi in modifying oak morphology, C and N incorporation and transcriptomics

Transcriptome analysis in oak uncovers a strong impact of endogenous rhythmic growth on the interaction with plant-parasitic nematodes

(2016) Hazel R. Maboreke et al.   BMC GENOMICS

Endogenous rhythmic growth, a trait suitable for the study of interplays between multitrophic interactions and tree development

(2016) S. Herrmann et al.   PERSPECTIVES IN PLANT ECOLOGY EVOLUTION AND SYSTEMATICS

Endogenous rhythmic growth in oak trees is regulated by internal clocks rather than resource availability

(2015) S. Herrmann et al.   JOURNAL OF EXPERIMENTAL BOTANY

Streptomyces-Induced Resistance Against Oak Powdery Mildew Involves Host Plant Responses in Defense, Photosynthesis, and Secondary Metabolism Pathways

(2014) Florence Kurth et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Sweets for the foe - effects of nonstructural carbohydrates on the susceptibility ofQuercus roburagainstPhytophthora quercina

(2014) Oguzhan Angay et al.   NEW PHYTOLOGIST

OakContigDF159.1, a reference library for studying differential gene expression inQuercus roburduring controlled biotic interactions: use for quantitative transcriptomic profiling of oak roots in ectomycorrhizal symbiosis

(2013) Mika T. Tarkka et al.   NEW PHYTOLOGIST

Root Herbivore Effects on Aboveground Multitrophic Interactions: Patterns, Processes and Mechanisms

(2012) Roxina Soler et al.   JOURNAL OF CHEMICAL ECOLOGY

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Impacts of grazing soil fauna on decomposer fungi are species-specific and density-dependent

(2011) Thomas W. Crowther et al.   Fungal Ecology

Mechanosensing and thigmomorphogenesis, a physiological and biomechanical point of view

(2010) Catherine Coutand   PLANT SCIENCE

Additive and interactive effects of functionally dissimilar soil organisms on a grassland plant community

(2010) Natalia Ladygina et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil arthropods beneficially rather than detrimentally impact plant performance in experimental grassland systems of different diversity

(2010) Nico Eisenhauer et al.   SOIL BIOLOGY & BIOCHEMISTRY

Decomposer animals induce differential expression of defence and auxin-responsive genes in plants

(2010) Kerstin Endlweber et al.   SOIL BIOLOGY & BIOCHEMISTRY

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Decomposers and root feeders interactively affect plant defence in Sinapis alba

(2009) Maité Lohmann et al.   OECOLOGIA

Collembola switch diet in presence of plant roots thereby functioning as herbivores

(2009) Kerstin Endlweber et al.   SOIL BIOLOGY & BIOCHEMISTRY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

ABOVE- AND BELOWGROUND INTERACTIONS ARE MEDIATED BY NUTRIENT AVAILABILITY

(2008) Josephine Haase et al.   ECOLOGY

Earthworms, Collembola and residue management change wheat (Triticum aestivum) and herbivore pest performance (Aphidina: Rhophalosiphum padi)

(2008) Xin Ke et al.   OECOLOGIA

Plant Defense Priming against Herbivores: Getting Ready for a Different Battle

(2008) C. J. Frost et al.   PLANT PHYSIOLOGY

Effects of Collembola and fertilizers on plant performance (Triticum aestivum) and aphid reproduction (Rhopalosiphum padi)

(2007) Kirsten Schütz et al.   BASIC AND APPLIED ECOLOGY