The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Mixtures of Plant-Growth-Promoting Rhizobacteria Enhance Biological Control of Multiple Plant Diseases and Plant-Growth Promotion in the Presence of Pathogens

(2018) Ke Liu et al.   PLANT DISEASE

Use of an improved high-throughput absolute abundance quantification method to characterize soil bacterial community and dynamics

(2018) Li Yang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Assessing soil bacterial community and dynamics by integrated high-throughput absolute abundance quantification

(2018) Jun Lou et al.   PeerJ

Neanderthal behaviour, diet, and disease inferred from ancient DNA in dental calculus

(2017) Laura S. Weyrich et al.   NATURE

Selection and Assessment of Plant Growth-Promoting Rhizobacteria for Biological Control of Multiple Plant Diseases

(2017) Ke Liu et al.   PHYTOPATHOLOGY

First Report of Streptomyces bottropensis Causing Potato Common Scab in Hebei Province, China

(2017) Bo Zhou et al.   PLANT DISEASE

Gut microbiota from multiple sclerosis patients enables spontaneous autoimmune encephalomyelitis in mice

(2017) Kerstin Berer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tomato root microbiota and Phytophthora parasitica-associated disease

(2017) Marie Larousse et al.   Microbiome

Huanglongbing impairs the rhizosphere-to-rhizoplane enrichment process of the citrus root-associated microbiome

(2017) Yunzeng Zhang et al.   Microbiome

Microbial community ecology: Function over phylogeny

(2017) Sean M. Gibbons   Nature Ecology & Evolution

Soil bacterial quantification approaches coupling with relative abundances reflecting the changes of taxa

(2017) Zhaojing Zhang et al.   Scientific Reports

Plant Diseases and Management Approaches in Organic Farming Systems

(2016) A.H.C. van Bruggen et al.   Annual Review of Phytopathology

Evaluation of biological control and rhizosphere competence of plant growth promoting bacteria

(2016) Evelise Bach et al.   APPLIED SOIL ECOLOGY

Global biogeography of microbial nitrogen-cycling traits in soil

(2016) Michaeline B. Nelson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Decoupling function and taxonomy in the global ocean microbiome

(2016) S. Louca et al.   SCIENCE

Microbial diversity drives multifunctionality in terrestrial ecosystems

(2016) Manuel Delgado-Baquerizo et al.   Nature Communications

Editorial: Harnessing Useful Rhizosphere Microorganisms for Pathogen and Pest Biocontrol

(2016) Aurelio Ciancio et al.   Frontiers in Microbiology

Soil health indicators and Fusarium wilt suppression in organically and conventionally managed greenhouse soils

(2015) Ariena H.C. van Bruggen et al.   APPLIED SOIL ECOLOGY

Trichodermaspecies for biocontrol of soil-borne plant pathogens of pasture species

(2015) D.R.W. Kandula et al.   BIOCONTROL SCIENCE AND TECHNOLOGY

Molecular and functional characteristics of streptomycete communities in relation to soil factors and potato common scab

(2015) Pingping Sun et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Community Analysis of Root- and Tuber-Associated Bacteria in Field-Grown Potato Plants Harboring Different Resistance Levels against Common Scab

(2015) Akira Kobayashi et al.   MICROBES AND ENVIRONMENTS

Cyclic Lipopeptides ofBacillus amyloliquefacienssubsp.plantarumColonizing the Lettuce Rhizosphere Enhance Plant Defense Responses Toward the Bottom Rot PathogenRhizoctonia solani

(2015) Soumitra Paul Chowdhury et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

MetaPhlAn2 for enhanced metagenomic taxonomic profiling

(2015) Duy Tin Truong et al.   NATURE METHODS

Pseudomonas fluorescens LBUM223 Increases Potato Yield and Reduces Common Scab Symptoms in the Field

(2015) Tanya Arseneault et al.   PHYTOPATHOLOGY

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Native root-associated bacteria rescue a plant from a sudden-wilt disease that emerged during continuous cropping

(2015) Rakesh Santhanam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial consortium-mediated plant defense against phytopathogens: Readdressing for enhancing efficacy

(2015) Birinchi Kumar Sarma et al.   SOIL BIOLOGY & BIOCHEMISTRY

Unearthing the role of biological diversity in soil health

(2015) Howard Ferris et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial Invasions: The Process, Patterns, and Mechanisms

(2015) Cyrus Alexander Mallon et al.   TRENDS IN MICROBIOLOGY

Biodiversity enhances ecosystem multifunctionality across trophic levels and habitats

(2015) Jonathan S. Lefcheck et al.   Nature Communications

Determination of Factors Associated with Natural Soil Suppressivity to Potato Common Scab

(2015) Marketa Sagova-Mareckova et al.   PLoS One

Microbial community analysis in rice paddy soils irrigated by acid mine drainage contaminated water

(2014) Min Sun et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Multiple diversity–stability mechanisms enhance population and community stability in aquatic food webs

(2014) Amy L. Downing et al.   ECOLOGY

Selection on soil microbiomes reveals reproducible impacts on plant function

(2014) Kevin Panke-Buisse et al.   ISME Journal

Altitudinal Distribution Patterns of Soil Bacterial and Archaeal Communities Along Mt. Shegyla on the Tibetan Plateau

(2014) Jun-Tao Wang et al.   MICROBIAL ECOLOGY

Managing scab diseases of potato and radish caused by Streptomyces spp. using Bacillus amyloliquefaciens BAC03 and other biomaterials

(2013) Qingxiao Meng et al.   BIOLOGICAL CONTROL

Adaptive Long-Term Monitoring of Soil Health in Metal Phytostabilization: Ecological Attributes and Ecosystem Services Based on Soil Microbial Parametersxs

(2013) Lur Epelde et al.   INTERNATIONAL JOURNAL OF PHYTOREMEDIATION

Phytotoxins produced by plant pathogenicStreptomycesspecies

(2013) D.R.D. Bignell et al.   JOURNAL OF APPLIED MICROBIOLOGY

Field efficacy of nonpathogenicStreptomycesspecies against potato common scab

(2013) L.A. Wanner et al.   JOURNAL OF APPLIED MICROBIOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Stability of soil microbial structure and activity depends on microbial diversity

(2013) Vincent Tardy et al.   Environmental Microbiology Reports

Steroid Hormone Signaling Is Essential to Regulate Innate Immune Cells and Fight Bacterial Infection in Drosophila

(2013) Jennifer C. Regan et al.   PLoS Pathogens

Biocontrol of tomato wilt disease byBacillus subtilisisolates from natural environments depends on conserved genes mediating biofilm formation

(2012) Yun Chen et al.   ENVIRONMENTAL MICROBIOLOGY

Niche dimensionality links biodiversity and invasibility of microbial communities

(2012) Nico Eisenhauer et al.   FUNCTIONAL ECOLOGY

Draft Genome Sequence of Streptomyces acidiscabies 84-104, an Emergent Plant Pathogen

(2012) J. C. Huguet-Tapia et al.   JOURNAL OF BACTERIOLOGY

Gut-Associated Bacteria Throughout the Life Cycle of the Bark Beetle Dendroctonus rhizophagus Thomas and Bright (Curculionidae: Scolytinae) and Their Cellulolytic Activities

(2012) Jesús Morales-Jiménez et al.   MICROBIAL ECOLOGY

A metagenome-wide association study of gut microbiota in type 2 diabetes

(2012) Junjie Qin et al.   NATURE

Cytochrome P450–catalyzed L-tryptophan nitration in thaxtomin phytotoxin biosynthesis

(2012) Sarah M Barry et al.   Nature Chemical Biology

In Search of Better Management of Potato Common Scab

(2012) Merete W. Dees et al.   POTATO RESEARCH

Wolbachia as an “Infectious” Extrinsic Factor Manipulating Host Signaling Pathways

(2012) Ilaria Negri   Frontiers in Endocrinology

The Multifactorial Basis for Plant Health Promotion by Plant-Associated Bacteria

(2011) Young Cheol Kim et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Combined Use of Biocontrol Agents to Manage Plant Diseases in Theory and Practice

(2011) X.-M. Xu et al.   PHYTOPATHOLOGY

Biodiversity characterization of cellulolytic bacteria present on native Chaco soil by comparison of ribosomal RNA genes

(2011) Paola Talia et al.   RESEARCH IN MICROBIOLOGY

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

The ability of Pseudomonas sp. LBUM 223 to produce phenazine-1-carboxylic acid affects the growth of Streptomyces scabies, the expression of thaxtomin biosynthesis genes and the biological control potential against common scab of potato

(2010) Renée St-Onge et al.   FEMS MICROBIOLOGY ECOLOGY

Isolation and characterization of antagonistic fungi against potato scab pathogens from potato field soils

(2010) Masahiro Tagawa et al.   FEMS MICROBIOLOGY LETTERS

Examining the global distribution of dominant archaeal populations in soil

(2010) Scott T Bates et al.   ISME Journal

Streptomyces turgidiscabies Car8 contains a modular pathogenicity island that shares virulence genes with other actinobacterial plant pathogens

(2010) José C. Huguet-Tapia et al.   PLASMID

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Plant–microbe interactions promoting plant growth and health: perspectives for controlled use of microorganisms in agriculture

(2009) Gabriele Berg   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology

(2009) Tsai-Tien Tseng et al.   BMC MICROBIOLOGY

Plant pathogen protection by arbuscular mycorrhizas: A role for fungal diversity?

(2009) Jeannine Wehner et al.   PEDOBIOLOGIA

Predicting invasion success in complex ecological networks

(2009) T. N. Romanuk et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The thaxtomin phytotoxins: Sources, synthesis, biosynthesis, biotransformation and biological activity

(2009) Russell R. King et al.   PHYTOCHEMISTRY

Involvement of the Plant Polymer Suberin and the Disaccharide Cellobiose in Triggering Thaxtomin A Biosynthesis, a Phytotoxin Produced by the Pathogenic AgentStreptomyces scabies

(2009) Sylvain Lerat et al.   PHYTOPATHOLOGY

Quantitative changes of plant defense enzymes and phytohormone in biocontrol of cucumber Fusarium wilt by Bacillus subtilis B579

(2009) Fang Chen et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Thaxtomin biosynthesis: the path to plant pathogenicity in the genus Streptomyces

(2008) Rosemary Loria et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Interactions and biocontrol of pathogenicStreptomycesstrains co-occurring in potato scab lesions

(2008) L.H. Hiltunen et al.   JOURNAL OF APPLIED MICROBIOLOGY

Using theTxtABOperon to Quantify PathogenicStreptomycesin Potato Tubers and Soil

(2008) Xinshun Qu et al.   PHYTOPATHOLOGY