Invited review: efficient computation strategies in genomic selection

Implementation of genomic recursions in single-step genomic best linear unbiased predictor for US Holsteins with a large number of genotyped animals

(2016) Y. Masuda et al.   JOURNAL OF DAIRY SCIENCE

Inexpensive Computation of the Inverse of the Genomic Relationship Matrix in Populations with Small Effective Population Size

(2015) I. Misztal   GENETICS

Genetic evaluation using single-step genomic best linear unbiased predictor in American Angus1

(2015) D. A. L. Lourenco et al.   JOURNAL OF ANIMAL SCIENCE

Technical note: Acceleration of sparse operations for average-information REML analyses with supernodal methods and sparse-storage refinements1,2

(2015) Y. Masuda et al.   JOURNAL OF ANIMAL SCIENCE

Hot topic: Use of genomic recursions in single-step genomic best linear unbiased predictor (BLUP) with a large number of genotypes

(2015) B.O. Fragomeni et al.   JOURNAL OF DAIRY SCIENCE

Differences between genomic-based and pedigree-based relationships in a chicken population, as a function of quality control and pedigree links among individuals

(2014) H. Wang et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

A single-step genomic model with direct estimation of marker effects

(2014) Z. Liu et al.   JOURNAL OF DAIRY SCIENCE

Using recursion to compute the inverse of the genomic relationship matrix

(2014) I. Misztal et al.   JOURNAL OF DAIRY SCIENCE

Single Step, a general approach for genomic selection

(2014) Andres Legarra et al.   Livestock Science

Genome-wide association mapping including phenotypes from relatives without genotypes

(2012) H. WANG et al.   Genetics Research

Computational strategies for national integration of phenotypic, genomic, and pedigree data in a single-step best linear unbiased prediction

(2012) A. Legarra et al.   JOURNAL OF DAIRY SCIENCE

A Fast EM Algorithm for BayesA-Like Prediction of Genomic Breeding Values

(2012) Xiaochen Sun et al.   PLoS One

Efficient computation of the genomic relationship matrix and other matrices used in single-step evaluation

(2011) I. Aguilar et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Hot topic: A unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score1

(2010) I. Aguilar et al.   JOURNAL OF DAIRY SCIENCE

Best Linear Unbiased Prediction of Genomic Breeding Values Using a Trait-Specific Marker-Derived Relationship Matrix

(2010) Zhe Zhang et al.   PLoS One

Additive Genetic Variability and the Bayesian Alphabet

(2009) D. Gianola et al.   GENETICS

Technical note: Derivation of equivalent computing algorithms for genomic predictions and reliabilities of animal merit

(2009) I. Strandén et al.   JOURNAL OF DAIRY SCIENCE

Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic information

(2009) I. Misztal et al.   JOURNAL OF DAIRY SCIENCE

A relationship matrix including full pedigree and genomic information

(2009) A. Legarra et al.   JOURNAL OF DAIRY SCIENCE

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Invited Review: Reliability of genomic predictions for North American Holstein bulls

(2008) P.M. VanRaden et al.   JOURNAL OF DAIRY SCIENCE

Technical Note: Computing Strategies in Genome-Wide Selection

(2007) A. Legarra et al.   JOURNAL OF DAIRY SCIENCE