Computational strategies for national integration of phenotypic, genomic, and pedigree data in a single-step best linear unbiased prediction

Regularization Paths for Generalized Linear Models via Coordinate Descent

(2015) Jerome Friedman et al.   Journal of Statistical Software

Bias in genomic predictions for populations under selection

(2011) Z. G. VITEZICA et al.   Genetics Research

Efficient computation of the genomic relationship matrix and other matrices used in single-step evaluation

(2011) I. Aguilar et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Effect of different genomic relationship matrices on accuracy and scale1

(2011) C. Y. Chen et al.   JOURNAL OF ANIMAL SCIENCE

Evidence of biases in genetic evaluations due to genomic preselection in dairy cattle

(2011) C. Patry et al.   JOURNAL OF DAIRY SCIENCE

Multiple-trait genomic evaluation of linear type traits using genomic and phenotypic data in US Holsteins

(2011) S. Tsuruta et al.   JOURNAL OF DAIRY SCIENCE

Genomic selection and complex trait prediction using a fast EM algorithm applied to genome-wide markers

(2010) Ross K Shepherd et al.   BMC BIOINFORMATICS

Improved Lasso for genomic selection

(2010) ANDRÉS LEGARRA et al.   Genetics Research

Hot topic: A unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score1

(2010) I. Aguilar et al.   JOURNAL OF DAIRY SCIENCE

Best Linear Unbiased Prediction of Genomic Breeding Values Using a Trait-Specific Marker-Derived Relationship Matrix

(2010) Zhe Zhang et al.   PLoS One

QMSim: a large-scale genome simulator for livestock

(2009) M. Sargolzaei et al.   BIOINFORMATICS

Predicting Quantitative Traits With Regression Models for Dense Molecular Markers and Pedigree

(2009) G. de los Campos et al.   GENETICS

Technical note: Derivation of equivalent computing algorithms for genomic predictions and reliabilities of animal merit

(2009) I. Strandén et al.   JOURNAL OF DAIRY SCIENCE

Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic information

(2009) I. Misztal et al.   JOURNAL OF DAIRY SCIENCE

A relationship matrix including full pedigree and genomic information

(2009) A. Legarra et al.   JOURNAL OF DAIRY SCIENCE

Short Communication: Correlations of Marker-Assisted Breeding Values with Progeny-Test Breeding Values for Eight Hundred Ninety-Nine French Holstein Bulls

(2008) F. Guillaume et al.   JOURNAL OF DAIRY SCIENCE

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Invited Review: Reliability of genomic predictions for North American Holstein bulls

(2008) P.M. VanRaden et al.   JOURNAL OF DAIRY SCIENCE

Technical Note: Computing Strategies in Genome-Wide Selection

(2007) A. Legarra et al.   JOURNAL OF DAIRY SCIENCE