Comparative Genome Analysis of Lactococcus lactis Indicates Niche Adaptation and Resolves Genotype/Phenotype Disparity

Determination of the cell wall polysaccharide and teichoic acid structures from Lactococcus lactis IL1403

(2018) Evgeny Vinogradov et al.   CARBOHYDRATE RESEARCH

Structural studies of the cell wall polysaccharide from Lactococcus lactis UC509.9

(2018) Evgeny Vinogradov et al.   CARBOHYDRATE RESEARCH

Assessing the functionality and genetic diversity of lactococcal prophages

(2018) Philip Kelleher et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Large plasmidome of dairy Lactococcus lactis subsp. lactis biovar diacetylactis FM03P encodes technological functions and appears highly unstable

(2018) Oscar van Mastrigt et al.   BMC GENOMICS

The Enigmatic Esx Proteins: Looking Beyond Mycobacteria

(2017) Meera Unnikrishnan et al.   TRENDS IN MICROBIOLOGY

Another Brick in the Wall: a Rhamnan Polysaccharide Trapped inside Peptidoglycan of Lactococcus lactis

(2017) Irina Sadovskaya et al.   mBio

IMG/M: integrated genome and metagenome comparative data analysis system

(2016) I-Min A. Chen et al.   NUCLEIC ACIDS RESEARCH

Plasmid Complement of Lactococcus lactis NCDO712 Reveals a Novel Pilus Gene Cluster

(2016) Mariya Tarazanova et al.   PLoS One

Evaluation of Lactococcus lactis Isolates from Nondairy Sources with Potential Dairy Applications Reveals Extensive Phenotype-Genotype Disparity and Implications for a Revised Species

(2015) Daniel Cavanagh et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The targeted recognition ofLactococcus lactisphages to their polysaccharide receptors

(2015) Orla McCabe et al.   MOLECULAR MICROBIOLOGY

The Evolution of Animal Domestication

(2014) Greger Larson et al.   Annual Review of Ecology Evolution and Systematics

Putrescine production via the agmatine deiminase pathway increases the growth of Lactococcus lactis and causes the alkalinization of the culture medium

(2014) Beatriz del Rio et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Lactococcus lactis Metabolism and Gene Expression during Growth on Plant Tissues

(2014) Benjamin L. Golomb et al.   JOURNAL OF BACTERIOLOGY

Production of Aroma Compounds in Lactic Fermentations

(2014) E.J. Smid et al.   Annual Review of Food Science and Technology

Differences in Lactococcal Cell Wall Polysaccharide Structure Are Major Determining Factors in Bacteriophage Sensitivity

(2014) S. Ainsworth et al.   mBio

Investigation of the Relationship between Lactococcal Host Cell Wall Polysaccharide Genotype and 936 Phage Receptor Binding Protein Phylogeny

(2013) J. Mahony et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Selective transport by SecA2: An expanding family of customized motor proteins

(2013) Barbara A. Bensing et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Genotype-phenotype matching analysis of 38 Lactococcus lactis strains using random forest methods

(2013) Jumamurat R Bayjanov et al.   BMC MICROBIOLOGY

Explaining microbial phenotypes on a genomic scale: GWAS for microbes

(2013) B. E. Dutilh et al.   Briefings in Functional Genomics

Archaeology: The milk revolution

(2013) Andrew Curry   NATURE

Lactobacillus paracasei Comparative Genomics: Towards Species Pan-Genome Definition and Exploitation of Diversity

(2013) Tamara Smokvina et al.   PLoS One

Interaction between the genomes of Lactococcus lactis and phages of the P335 species

(2013) William J. Kelly et al.   Frontiers in Microbiology

The Maltose ABC Transporter in Lactococcus lactis Facilitates High-Level Sensitivity to the Circular Bacteriocin Garvicin ML

(2012) Christina Gabrielsen et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

PhenoLink - a web-tool for linking phenotype to ~omics data for bacteria: application to gene-trait matching for Lactobacillus plantarum strains

(2012) Jumamurat R Bayjanov et al.   BMC GENOMICS

New insights into Lactococcus lactis diacetyl- and acetoin-producing strains isolated from diverse origins

(2012) Delphine Passerini et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Complete Genome Sequence of the Serotype k Streptococcus mutans Strain LJ23

(2012) C. Aikawa et al.   JOURNAL OF BACTERIOLOGY

Ter-dependent stress response systems: novel pathways related to metal sensing, production of a nucleoside-like metabolite, and DNA-processing

(2012) Vivek Anantharaman et al.   Molecular BioSystems

Earliest evidence for cheese making in the sixth millennium bc in northern Europe

(2012) Mélanie Salque et al.   NATURE

Complete genome and comparative analysis of Streptococcus gallolyticus subsp. gallolyticus, an emerging pathogen of infective endocarditis

(2011) Dennis Hinse et al.   BMC GENOMICS

Microbial domestication signatures of Lactococcus lactis can be reproduced by experimental evolution

(2011) H. Bachmann et al.   GENOME RESEARCH

The evolution of lactase persistence in Europe. A synthesis of archaeological and genetic evidence

(2011) Michela Leonardi et al.   INTERNATIONAL DAIRY JOURNAL

Genomic diversity and versatility of Lactobacillus plantarum, a natural metabolic engineer

(2011) Roland J Siezen et al.   Microbial Cell Factories

Adaptative Potential of the Lactococcus Lactis IL594 Strain Encoded in Its 7 Plasmids

(2011) Roman K. Górecki et al.   PLoS One

The Evolution of Host Specialization in the Vertebrate Gut Symbiont Lactobacillus reuteri

(2011) Steven A. Frese et al.   PLoS Genetics

Genome-scale diversity and niche adaptation analysis of Lactococcus lactis by comparative genome hybridization using multi-strain arrays

(2011) Roland J. Siezen et al.   Microbial Biotechnology

Genomic Island TnSmu2 of Streptococcus mutans Harbors a Nonribosomal Peptide Synthetase-Polyketide Synthase Gene Cluster Responsible for the Biosynthesis of Pigments Involved in Oxygen and H2O2 Tolerance

(2010) C. Wu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PanCGHweb: a web tool for genotype calling in pangenome CGH data

(2010) J. R. Bayjanov et al.   BIOINFORMATICS

The proteolytic system of lactic acid bacteria revisited: a genomic comparison

(2010) Mengjin Liu et al.   BMC GENOMICS

The extracellular biology of the lactobacilli

(2010) Michiel Kleerebezem et al.   FEMS MICROBIOLOGY REVIEWS

Chromosomal diversity in Lactococcus lactis and the origin of dairy starter cultures

(2010) W. J. Kelly et al.   Genome Biology and Evolution

Lactococcus lactis subsp. tructae subsp. nov. isolated from the intestinal mucus of brown trout (Salmo trutta) and rainbow trout (Oncorhynchus mykiss)

(2010) T. Perez et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Complete Genome Sequence of Lactococcus lactis subsp. lactis KF147, a Plant-Associated Lactic Acid Bacterium

(2010) R. J. Siezen et al.   JOURNAL OF BACTERIOLOGY

Genes but Not Genomes Reveal Bacterial Domestication of Lactococcus Lactis

(2010) Delphine Passerini et al.   PLoS One

PanCGH: a genotype-calling algorithm for pangenome CGH data

(2009) Jumamurat R. Bayjanov et al.   BIOINFORMATICS

Phenotypic and genomic diversity ofLactobacillus plantarumstrains isolated from various environmental niches

(2009) Roland J. Siezen et al.   ENVIRONMENTAL MICROBIOLOGY

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

A comparative view of the evolution of grasses under domestication

(2009) Sylvain Glémin et al.   NEW PHYTOLOGIST