Soil Organic Carbon Chemical Functional Groups under Different Revegetation Types Are Coupled with Changes in the Microbial Community Composition and the Functional Genes

Different revegetation types alter soil physical-chemical characteristics and fungal community in the Baishilazi Nature Reserve

(2019) Jiaojiao Deng et al.   PeerJ

Soil carbon storage predicted from the diversity of pyrolytic alkanes

(2018) Marco A. Jiménez-González et al.   BIOLOGY AND FERTILITY OF SOILS

Land-use type strongly shapes community composition, but not always diversity of soil microbes in tropical China

(2018) Zhi-quan Cai et al.   CATENA

Changes in soil microbial community are linked to soil carbon fractions after afforestation

(2018) F. Z. Zhao et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Effects of revegetation and precipitation gradient on soil carbon and nitrogen variations in deep profiles on the Loess Plateau of China

(2018) Dengfeng Tuo et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Early stage litter decomposition across biomes

(2018) Ika Djukic et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Decreased occurrence of carbon cycle functions in microbial communities along with long-term secondary succession

(2018) Yangquanwei Zhong et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effects of Nitrogen and Phosphorus Inputs on Soil Bacterial Abundance, Diversity, and Community Composition in Chinese Fir Plantations

(2018) Qing Wang et al.   Frontiers in Microbiology

Effects of agricultural management on soil organic matter and carbon transformation – a review

(2018) X. Liu et al.   PLANT SOIL AND ENVIRONMENT

Variations in Soil Bacterial Community Diversity and Structures Among Different Revegetation Types in the Baishilazi Nature Reserve

(2018) Jiaojiao Deng et al.   Frontiers in Microbiology

Forest-type shift and subsequent intensive management affected soil organic carbon and microbial community in southeastern China

(2017) Xianghua Fang et al.   EUROPEAN JOURNAL OF FOREST RESEARCH

Long-term effects of climate change on carbon storage and tree species composition in a dry deciduous forest

(2017) István Fekete et al.   GLOBAL CHANGE BIOLOGY

Embracing the unknown: disentangling the complexities of the soil microbiome

(2017) Noah Fierer   NATURE REVIEWS MICROBIOLOGY

Changes in soil microbial community and organic carbon fractions under short-term straw return in a rice–wheat cropping system

(2017) Zhaoming Chen et al.   SOIL & TILLAGE RESEARCH

Linking soil fungal community structure and function to soil organic carbon chemical composition in intensively managed subtropical bamboo forests

(2017) Yongchun Li et al.   SOIL BIOLOGY & BIOCHEMISTRY

Linkages of C:N:P stoichiometry and bacterial community in soil following afforestation of former farmland

(2016) Chengjie Ren et al.   FOREST ECOLOGY AND MANAGEMENT

Metagenomic analysis of rapid gravity sand filter microbial communities suggests novel physiology of Nitrospira spp.

(2016) Alejandro Palomo et al.   ISME Journal

Microbial regulation of the soil carbon cycle: evidence from gene–enzyme relationships

(2016) Pankaj Trivedi et al.   ISME Journal

Diversity and distribution patterns of root-associated fungi on herbaceous plants in alpine meadows of southwestern China

(2016) Qian Gao et al.   MYCOLOGIA

Network analysis reveals functional redundancy and keystone taxa amongst bacterial and fungal communities during organic matter decomposition in an arable soil

(2016) Samiran Banerjee et al.   SOIL BIOLOGY & BIOCHEMISTRY

Responsiveness of soil nitrogen fractions and bacterial communities to afforestation in the Loess Hilly Region (LHR) of China

(2016) Chengjie Ren et al.   Scientific Reports

Responses of Bacterial Communities to Simulated Climate Changes in Alpine Meadow Soil of the Qinghai-Tibet Plateau

(2015) Junpeng Rui et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Changes of soil labile organic carbon fractions and their relation to soil microbial characteristics in four typical wetlands of Sanjiang Plain, Northeast China

(2015) Ye Xiao et al.   ECOLOGICAL ENGINEERING

Linkages between the soil organic matter fractions and the microbial metabolic functional diversity within a broad-leaved Korean pine forest

(2015) Jing Tian et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Soil microbial community composition rather than litter quality is linked with soil organic carbon chemical composition in plantations in subtropical China

(2015) Hui Wang et al.   JOURNAL OF SOILS AND SEDIMENTS

Soil organic matter quantity and quality shape microbial community compositions of subtropical broadleaved forests

(2015) Junjun Ding et al.   MOLECULAR ECOLOGY

Shifts in microbial diversity through land use intensity as drivers of carbon mineralization in soil

(2015) Vincent Tardy et al.   SOIL BIOLOGY & BIOCHEMISTRY

Composition of fungal and bacterial communities in forest litter and soil is largely determined by dominant trees

(2015) Michaela Urbanová et al.   SOIL BIOLOGY & BIOCHEMISTRY

Differences in Chemical Composition of Soil Organic Carbon Resulting From Long-Term Fertilization Strategies

(2015) Zengqiang Li et al.   PLoS One

Global covariation of carbon turnover times with climate in terrestrial ecosystems

(2014) Nuno Carvalhais et al.   NATURE

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Tree species influence on microbial communities in litter and soil: Current knowledge and research needs

(2013) Cindy E. Prescott et al.   FOREST ECOLOGY AND MANAGEMENT

Converting native shrub forests to Chinese chestnut plantations and subsequent intensive management affected soil C and N pools

(2013) Yongfu Li et al.   FOREST ECOLOGY AND MANAGEMENT

Litter quality versus soil microbial community controls over decomposition: a quantitative analysis

(2013) Cory C. Cleveland et al.   OECOLOGIA

Does the chemical nature of soil carbon drive the structure and functioning of soil microbial communities?

(2013) E.-L. Ng et al.   SOIL BIOLOGY & BIOCHEMISTRY

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

(2012) Y. Peng et al.   BIOINFORMATICS

Cellulose utilization in forest litter and soil: identification of bacterial and fungal decomposers

(2012) Martina Štursová et al.   FEMS MICROBIOLOGY ECOLOGY

Tillage impacts on the fractions and compositions of soil organic carbon

(2012) Hong Zhao et al.   GEODERMA

Mineral fertilizer alters cellulolytic community structure and suppresses soil cellobiohydrolase activity in a long-term fertilization experiment

(2012) Fenliang Fan et al.   SOIL BIOLOGY & BIOCHEMISTRY

Litter quality assessed by solid state 13C NMR spectroscopy predicts decay rate better than C/N and Lignin/N ratios

(2012) Giuliano Bonanomi et al.   SOIL BIOLOGY & BIOCHEMISTRY

Warming and nitrogen deposition lessen microbial residue contribution to soil carbon pool

(2012) Chao Liang et al.   Nature Communications

Microbial control over carbon cycling in soil

(2012) Joshua P. Schimel et al.   Frontiers in Microbiology

13C-NMR spectroscopy studies of humic substances in subtropical perhumid montane forest soil

(2011) Tay-Lung Chung et al.   Journal of Forest Research

Persistence of soil organic matter as an ecosystem property

(2011) Michael W. I. Schmidt et al.   NATURE

Soil organic carbon stock and chemical composition in four plantations of indigenous tree species in subtropical China

(2010) Hui Wang et al.   ECOLOGICAL RESEARCH

Changes in microbial community characteristics and soil organic matter with nitrogen additions in two tropical forests

(2010) Daniela F. Cusack et al.   ECOLOGY

Microbial secondary succession in a chronosequence of chalk grasslands

(2010) Eiko E Kuramae et al.   ISME Journal

Ab initio gene identification in metagenomic sequences

(2010) Wenhan Zhu et al.   NUCLEIC ACIDS RESEARCH

Dynamics of alpine plant litter decomposition in a changing climate

(2010) Konstantin S. Gavazov   PLANT AND SOIL

Model of apparent and real priming effects: Linking microbial activity with soil organic matter decomposition

(2010) Sergey Blagodatsky et al.   SOIL BIOLOGY & BIOCHEMISTRY

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Community niche predicts the functioning of denitrifying bacterial assemblages

(2009) Joana F. Salles et al.   ECOLOGY

Testing the functional significance of microbial community composition

(2009) Michael S. Strickland et al.   ECOLOGY

Land use, tillage, texture and organic matter stock and composition in tropical and subtropical Brazilian soils

(2009) J. Dieckow et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

The role of plantations in managing the world's forests in the Anthropocene

(2009) Alain Paquette et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Soil organic carbon stabilization in dry tropical forests of Costa Rica

(2009) Klaus Lorenz et al.   GEODERMA

Soil Microbial Communities and Restoration Ecology: Facilitators or Followers?

(2009) J. Harris   SCIENCE

Assessing management impacts on soil organic matter quality in subtropical Australian forests using physical and chemical fractionation as well as 13C NMR spectroscopy

(2009) Yan He et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil carbon and nitrogen mineralization: Theory and models across scales

(2009) Stefano Manzoni et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effect of organic matter applications on13C-NMR spectra of humic acids of soil

(2008) S. Dou et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Effect of tree species on carbon stocks in forest floor and mineral soil and implications for soil carbon inventories

(2008) Catharina J.E. Schulp et al.   FOREST ECOLOGY AND MANAGEMENT

Influence of animal manure application on the chemical structures of soil organic matter as investigated by advanced solid-state NMR and FT-IR spectroscopy

(2008) Jingdong Mao et al.   GEODERMA

Altered patterns of soil carbon substrate usage and heterotrophic respiration in a pine forest with elevated CO2and N fertilization

(2008) SHARON A. BILLINGS et al.   GLOBAL CHANGE BIOLOGY

Terrestrial ecosystem carbon dynamics and climate feedbacks

(2008) Martin Heimann et al.   NATURE

Long-term manuring and fertilization effects on soil organic carbon pools under a wheat–maize cropping system in North China Plain

(2008) Wei Gong et al.   PLANT AND SOIL

Recovery of soil organic matter, organic matter turnover and nitrogen cycling in a post-mining forest rehabilitation chronosequence

(2008) N.C. Banning et al.   SOIL BIOLOGY & BIOCHEMISTRY

Changes in soil carbon during the establishment of a hardwood plantation in subtropical Australia

(2007) Zhiqun Huang et al.   FOREST ECOLOGY AND MANAGEMENT