Nutrigenomics of Vitamin D

The impact of the vitamin D-modulated epigenome on VDR target gene regulation

(2018) Veijo Nurminen et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Vitamin D Switches BAF Complexes to Protect β Cells

(2018) Zong Wei et al.   CELL

In vivo response of the human epigenome to vitamin D: A Proof-of-principle study

(2018) Carsten Carlberg et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

ETS transcription factor family member GABPA contributes to vitamin D receptor target gene regulation

(2018) Sabine Seuter et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

The concept of the personal vitamin D response index

(2018) Carsten Carlberg et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

The roles of vitamin D and cutaneous vitamin D production in human evolution and health

(2018) Nina G. Jablonski et al.   International Journal of Paleopathology

Dynamic Human Environmental Exposome Revealed by Longitudinal Personal Monitoring

(2018) Chao Jiang et al.   CELL

Machine learning approaches infer vitamin D signaling: Critical impact of vitamin D receptor binding within topologically associated domains

(2018) Carsten Carlberg et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

Shades of complexity: New perspectives on the evolution and genetic architecture of human skin

(2018) Ellen E. Quillen et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

Modulation of vitamin D signaling by the pioneer factor CEBPA

(2018) Veijo Nurminen et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

In vivo transcriptome changes of human white blood cells in response to vitamin D

(2018) Antonio Neme et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

Vitamin D controls the capacity of human dendritic cells to induce functional regulatory T cells by regulation of glucose metabolism

(2018) An-Sofie Vanherwegen et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

Vitamin D Supplements and Prevention of Cancer and Cardiovascular Disease

(2018) JoAnn E. Manson et al.   NEW ENGLAND JOURNAL OF MEDICINE

Molecular evaluation of vitamin D responsiveness of healthy young adults

(2017) Sabine Seuter et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

Vitamin D endocrinology on the cross-road between immunity and metabolism

(2017) An-Sofie Vanherwegen et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Molecular endocrinology of vitamin D on the epigenome level

(2017) Carsten Carlberg   MOLECULAR AND CELLULAR ENDOCRINOLOGY

A wellness study of 108 individuals using personal, dense, dynamic data clouds

(2017) Nathan D Price et al.   NATURE BIOTECHNOLOGY

Infant Respiratory Tract Infections or Wheeze and Maternal Vitamin D in Pregnancy

(2017) Nikolas Christensen et al.   PEDIATRIC INFECTIOUS DISEASE JOURNAL

Functional genomics analysis of vitamin D effects on CD4+ T cells in vivo in experimental autoimmune encephalomyelitis ‬

(2017) Manuel Zeitelhofer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adaptation of human skin color in various populations

(2017) Lian Deng et al.   HEREDITAS

Vitamin D supplementation during pregnancy and infancy reduces aeroallergen sensitization: a randomized controlled trial

(2016) C. C. Grant et al.   ALLERGY

Epigenetic Regulation of Monocyte and Macrophage Function

(2016) Marten A. Hoeksema et al.   ANTIOXIDANTS & REDOX SIGNALING

Vitamin D-dependent chromatin association of CTCF in human monocytes

(2016) Antonio Neme et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Chromatin Control of Developmental Dynamics and Plasticity

(2016) Matteo Perino et al.   DEVELOPMENTAL CELL

Variation in vitamin D deficiency among tuberculosis patients by ethnic group and geographical region of birth: evidence from a diverse south London population

(2016) Adam Pilarski et al.   EUROPEAN RESPIRATORY JOURNAL

Effect of Prenatal Supplementation With Vitamin D on Asthma or Recurrent Wheezing in Offspring by Age 3 Years

(2016) Augusto A. Litonjua et al.   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Role of Vitamin D in Inflammatory Bowel Disease

(2016) Berkeley N. Limketkai et al.   NUTRITION IN CLINICAL PRACTICE

Impact of Vitamin D on Infectious Disease

(2015) Malcolm D. Kearns et al.   AMERICAN JOURNAL OF THE MEDICAL SCIENCES

Dissecting high from low responders in a vitamin D3 intervention study

(2015) Noora Saksa et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

Integrative analysis of 111 reference human epigenomes

(2015) Anshul Kundaje et al.   NATURE

Epigenome-wide effects of vitamin D and their impact on the transcriptome of human monocytes involve CTCF

(2015) Sabine Seuter et al.   NUCLEIC ACIDS RESEARCH

Regulation of Dendritic Cell Function by Vitamin D

(2015) Myriam Barragan et al.   Nutrients

Relevance of Vitamin D Receptor Target Genes for Monitoring the Vitamin D Responsiveness of Primary Human Cells

(2015) Maja Vukić et al.   PLoS One

Primary vitamin D receptor target genes as biomarkers for the vitamin D3 status in the hematopoietic system

(2014) Julia Wilfinger et al.   JOURNAL OF NUTRITIONAL BIOCHEMISTRY

Changes in vitamin D target gene expression in adipose tissue monitor the vitamin D response of human individuals

(2014) Jussi Ryynänen et al.   MOLECULAR NUTRITION & FOOD RESEARCH

Identifying and mitigating bias in next-generation sequencing methods for chromatin biology

(2014) Clifford A. Meyer et al.   NATURE REVIEWS GENETICS

Patterns of Genome-Wide VDR Locations

(2014) Pauli Tuoresmäki et al.   PLoS One

Structural considerations of vitamin D signaling

(2014) Ferdinand Molnár   Frontiers in Physiology

Genome-wide (over)view on the actions of vitamin D

(2014) Carsten Carlberg   Frontiers in Physiology

Vitamin D: a critical and essential micronutrient for human health

(2014) Igor Bendik et al.   Frontiers in Physiology

The physiology of vitamin D—far more than calcium and bone

(2014) Carsten Carlberg   Frontiers in Physiology

A Vitamin D Receptor/SMAD Genomic Circuit Gates Hepatic Fibrotic Response

(2013) Ning Ding et al.   CELL

The nexus of chromatin regulation and intermediary metabolism

(2013) Philipp Gut et al.   NATURE

Epidemiology: A mortal foe

(2013) Tom Paulson   NATURE

Primary Vitamin D Target Genes Allow a Categorization of Possible Benefits of Vitamin D3 Supplementation

(2013) Carsten Carlberg et al.   PLoS One

Vitamin D and Immune Function

(2013) Barbara Prietl et al.   Nutrients

Dynamics and Memory of Heterochromatin in Living Cells

(2012) Nathaniel A. Hathaway et al.   CELL

Personal Omics Profiling Reveals Dynamic Molecular and Medical Phenotypes

(2012) Rui Chen et al.   CELL

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Topological domains in mammalian genomes identified by analysis of chromatin interactions

(2012) Jesse R. Dixon et al.   NATURE

Epigenetic impact of dietary polyphenols in cancer chemoprevention: Lifelong remodeling of our epigenomes

(2012) Wim Vanden Berghe   PHARMACOLOGICAL RESEARCH

What can epigenomics do for you?

(2012) Alexander Meissner   GENOME BIOLOGY

Densely Interconnected Transcriptional Circuits Control Cell States in Human Hematopoiesis

(2011) Noa Novershtern et al.   CELL

Pioneer transcription factors: establishing competence for gene expression

(2011) K. S. Zaret et al.   GENES & DEVELOPMENT

KDM6B/JMJD3 histone demethylase is induced by vitamin D and modulates its effects in colon cancer cells

(2011) Fábio Pereira et al.   HUMAN MOLECULAR GENETICS

VDR/RXR and TCF4/β-Catenin Cistromes in Colonic Cells of Colorectal Tumor Origin: Impact onc-FOSandc-MYCGene Expression

(2011) Mark B. Meyer et al.   MOLECULAR ENDOCRINOLOGY

Silencing chromatin: comparing modes and mechanisms

(2011) Christian Beisel et al.   NATURE REVIEWS GENETICS

Nuclear hormone 1α,25-dihydroxyvitamin D3 elicits a genome-wide shift in the locations of VDR chromatin occupancy

(2011) Sami Heikkinen et al.   NUCLEIC ACIDS RESEARCH

A ChIP-seq defined genome-wide map of vitamin D receptor binding: Associations with disease and evolution

(2010) S. V. Ramagopalan et al.   GENOME RESEARCH

Vitamin D: a pleiotropic hormone

(2010) Annemieke Verstuyf et al.   KIDNEY INTERNATIONAL

Nutrigenomics research for personalized nutrition and medicine

(2008) Jim Kaput   CURRENT OPINION IN BIOTECHNOLOGY