Host-Microbe Coevolution: Applying Evidence from Model Systems to Complex Marine Invertebrate Holobionts

Reef invertebrate viromics: diversity, host specificity and functional capacity

(2018) Patrick W. Laffy et al.   ENVIRONMENTAL MICROBIOLOGY

NanoSIMS and tissue autoradiography reveal symbiont carbon fixation and organic carbon transfer to giant ciliate host

(2018) Jean-Marie Volland et al.   ISME Journal

Comprehensive skin microbiome analysis reveals the uniqueness of human skin and evidence for phylosymbiosis within the class Mammalia

(2018) Ashley A. Ross et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Stable-Isotope Probing of Human and Animal Microbiome Function

(2018) David Berry et al.   TRENDS IN MICROBIOLOGY

Abundance determines the functional role of bacterial phylotypes in complex communities

(2018) Damian W. Rivett et al.   Nature Microbiology

Systematic Revision of Symbiodiniaceae Highlights the Antiquity and Diversity of Coral Endosymbionts

(2018) Todd C. LaJeunesse et al.   CURRENT BIOLOGY

Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny

(2018) F. Joseph Pollock et al.   Nature Communications

Is Host Filtering the Main Driver of Phylosymbiosis across the Tree of Life?

(2018) Florent Mazel et al.   mSystems

Integrated metabolism in sponge–microbe symbiosis revealed by genome-centered metatranscriptomics

(2017) Lucas Moitinho-Silva et al.   ISME Journal

Microbial communities exhibit host species distinguishability and phylosymbiosis along the length of the gastrointestinal tract

(2017) Kevin D. Kohl et al.   MOLECULAR ECOLOGY

Expression of eukaryotic-like protein in the microbiome of sponges

(2017) C. Díez-Vives et al.   MOLECULAR ECOLOGY

Global warming and recurrent mass bleaching of corals

(2017) Terry P. Hughes et al.   NATURE

Coral reefs in the Anthropocene

(2017) Terry P. Hughes et al.   NATURE

Kynurenine pathway metabolism and the microbiota-gut-brain axis

(2017) P.J. Kennedy et al.   NEUROPHARMACOLOGY

Insights into the lifestyle of uncultured bacterial natural product factories associated with marine sponges

(2017) Gerald Lackner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Defining the Core Microbiome in Corals’ Microbial Soup

(2017) Alejandra Hernandez-Agreda et al.   TRENDS IN MICROBIOLOGY

Defining the core microbiome of the symbiotic dinoflagellate, Symbiodinium

(2017) Caitlin A. Lawson et al.   Environmental Microbiology Reports

Evolutionary conservation of a core root microbiome across plant phyla along a tropical soil chronosequence

(2017) Yun Kit Yeoh et al.   Nature Communications

The evolution of host-symbiont dependence

(2017) Roberta M. Fisher et al.   Nature Communications

Broadcast Spawning Coral Mussismilia hispida Can Vertically Transfer its Associated Bacterial Core

(2017) Deborah C. A. Leite et al.   Frontiers in Microbiology

Endozoicomonas genomes reveal functional adaptation and plasticity in bacterial strains symbiotically associated with diverse marine hosts

(2017) Matthew J. Neave et al.   Scientific Reports

Diversity and function of prevalent symbiotic marine bacteria in the genus Endozoicomonas

(2016) Matthew J. Neave et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Differential specificity between closely related corals and abundant Endozoicomonas endosymbionts across global scales

(2016) Matthew J Neave et al.   ISME Journal

Evolution and function of eukaryotic-like proteins from sponge symbionts

(2016) David Reynolds et al.   MOLECULAR ECOLOGY

Cospeciation of gut microbiota with hominids

(2016) A. H. Moeller et al.   SCIENCE

The Sponge Hologenome

(2016) Nicole S. Webster et al.   mBio

Holes in the Hologenome: Why Host-Microbe Symbioses Are Not Holobionts

(2016) Angela E. Douglas et al.   mBio

Diversity, structure and convergent evolution of the global sponge microbiome

(2016) Torsten Thomas et al.   Nature Communications

Phylosymbiosis: Relationships and Functional Effects of Microbial Communities across Host Evolutionary History

(2016) Andrew W. Brooks et al.   PLOS BIOLOGY

Transitioning from Microbiome Composition to Microbial Community Interactions: The Potential of the Metaorganism Hydra as an Experimental Model

(2016) Peter Deines et al.   Frontiers in Microbiology

Keeping it in the family: Coevolution of latrunculid sponges and their dominant bacterial symbionts

(2016) Gwynneth F. Matcher et al.   MicrobiologyOpen

Getting the Hologenome Concept Right: an Eco-Evolutionary Framework for Hosts and Their Microbiomes

(2016) Kevin R. Theis et al.   mSystems

The Gut Microbiota of Termites: Digesting the Diversity in the Light of Ecology and Evolution

(2015) Andreas Brune et al.   Annual Review of Microbiology

Endosymbiosis and Eukaryotic Cell Evolution

(2015) John M. Archibald   CURRENT BIOLOGY

The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts

(2015) Tracy D Ainsworth et al.   ISME Journal

Characterization of Bacterial Communities Associated with the Tyrian Purple Producing Gland in a Marine Gastropod

(2015) Ajit Kumar Ngangbam et al.   PLoS One

Signatures of host/symbiont genome coevolution in insect nutritional endosymbioses

(2015) Alex C. C. Wilson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nitrogen cycling in corals: the key to understanding holobiont functioning?

(2015) Nils Rädecker et al.   TRENDS IN MICROBIOLOGY

The Hologenome Concept: Helpful or Hollow?

(2015) Nancy A. Moran et al.   PLOS BIOLOGY

Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes

(2015) Seth R. Bordenstein et al.   PLOS BIOLOGY

The versatile nature of coral-associated viruses

(2014) Yvan Bettarel et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial aggregates within tissues infect a diversity of corals throughout the Indo-Pacific

(2014) TM Work et al.   MARINE ECOLOGY PROGRESS SERIES

Symbiotic digestion of lignocellulose in termite guts

(2014) Andreas Brune   NATURE REVIEWS MICROBIOLOGY

Phylogenetic signal in the community structure of host-specific microbiomes of tropical marine sponges

(2014) Cole G. Easson et al.   Frontiers in Microbiology

Generating viral metagenomes from the coral holobiont

(2014) Karen D. Weynberg et al.   Frontiers in Microbiology

Shared Metabolic Pathways in a Coevolved Insect-Bacterial Symbiosis

(2013) Calum W. Russell et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Down under the tunic: bacterial biodiversity hotspots and widespread ammonia-oxidizing archaea in coral reef ascidians

(2013) Patrick M Erwin et al.   ISME Journal

Coral reef invertebrate microbiomes correlate with the presence of photosymbionts

(2013) David G Bourne et al.   ISME Journal

Ankyrin-repeat proteins from sponge symbionts modulate amoebal phagocytosis

(2013) Mary T. H. D. Nguyen et al.   MOLECULAR ECOLOGY

Relationships between Host Phylogeny, Host Type and Bacterial Community Diversity in Cold-Water Coral Reef Sponges

(2013) Sandra Schöttner et al.   PLoS One

Animals in a bacterial world, a new imperative for the life sciences

(2013) Margaret McFall-Ngai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Corals Form Characteristic Associations with Symbiotic Nitrogen-Fixing Bacteria

(2012) Kimberley A. Lema et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cultivating endosymbionts — Host environmental mimics support the survival of Symbiodinium C15 ex hospite

(2012) Thomas Krueger et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Intergenerational Transfer of Specific Bacteria in Corals and Possible Implications for Offspring Fitness

(2012) Janja Ceh et al.   MICROBIAL ECOLOGY

Symbiosis between hydra and chlorella: Molecular phylogenetic analysis and experimental study provide insight into its origin and evolution

(2012) Hitomi Kawaida et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The interplay between the intestinal microbiota and the brain

(2012) Stephen M. Collins et al.   NATURE REVIEWS MICROBIOLOGY

Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts

(2012) L. Fan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Speciation by symbiosis

(2012) Robert M. Brucker et al.   TRENDS IN ECOLOGY & EVOLUTION

Diversity and dynamics of bacterial communities in early life stages of the Caribbean coral Porites astreoides

(2011) Koty H Sharp et al.   ISME Journal

Using the Acropora digitifera genome to understand coral responses to environmental change

(2011) Chuya Shinzato et al.   NATURE

The dynamics of microbial partnerships in the coral Isopora palifera

(2010) Chung-Pin Chen et al.   ISME Journal

Antagonistic coevolution accelerates molecular evolution

(2010) Steve Paterson et al.   NATURE

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Bacterial Acquisition in Juveniles of Several Broadcast Spawning Coral Species

(2010) Koty H. Sharp et al.   PLoS One

Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities

(2010) Howard Ochman et al.   PLOS BIOLOGY

Coral-Associated Bacteria and Their Role in the Biogeochemical Cycling of Sulfur

(2009) J.-B. Raina et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversities of coral-associated bacteria differ with location, but not species, for three acroporid corals on the Great Barrier Reef

(2009) Raechel A. Littman et al.   FEMS MICROBIOLOGY ECOLOGY

Bacteriophages Encode Factors Required for Protection in a Symbiotic Mutualism

(2009) K. M. Oliver et al.   SCIENCE

The meaning of Darwin's “abominable mystery”

(2008) William E. Friedman   AMERICAN JOURNAL OF BOTANY

Hawaiian bobtail squid

(2008) Margaret McFall-Ngai   CURRENT BIOLOGY

Host-bacterial coevolution and the search for new drug targets

(2008) Jesse Zaneveld et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Cospeciation of termite gut flagellates and their bacterial endosymbionts:Trichonymphaspecies and ‘CandidatusEndomicrobium trichonymphae’

(2008) WAKAKO IKEDA-OHTSUBO et al.   MOLECULAR ECOLOGY