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Title
JACKS: joint analysis of CRISPR/Cas9 knockout screens
Authors
Keywords
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Journal
GENOME RESEARCH
Volume 29, Issue 3, Pages 464-471
Publisher
Cold Spring Harbor Laboratory
Online
2019-01-24
DOI
10.1101/gr.238923.118
References
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- (2018) Swee Hoe Ong et al. Scientific Reports
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- (2018) Francesco Iorio et al. BMC GENOMICS
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- (2017) Robin M Meyers et al. NATURE GENETICS
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- sgRNA Scorer 2.0: A Species-Independent Model To Predict CRISPR/Cas9 Activity
- (2017) Raj Chari et al. ACS Synthetic Biology
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- (2017) Traver Hart et al. G3-Genes Genomes Genetics
- CRISPRpred: A flexible and efficient tool for sgRNAs on-target activity prediction in CRISPR/Cas9 systems
- (2017) Md. Khaledur Rahman et al. PLoS One
- BAGEL: a computational framework for identifying essential genes from pooled library screens
- (2016) Traver Hart et al. BMC BIOINFORMATICS
- Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9
- (2016) John G Doench et al. NATURE BIOTECHNOLOGY
- Genomic Copy Number Dictates a Gene-Independent Cell Response to CRISPR/Cas9 Targeting
- (2016) A. J. Aguirre et al. Cancer Discovery
- A CRISPR Dropout Screen Identifies Genetic Vulnerabilities and Therapeutic Targets in Acute Myeloid Leukemia
- (2016) Konstantinos Tzelepis et al. Cell Reports
- A Biophysical Model of CRISPR/Cas9 Activity for Rational Design of Genome Editing and Gene Regulation
- (2016) Iman Farasat et al. PLoS Computational Biology
- Nucleosomes impede Cas9 access to DNA in vivo and in vitro
- (2016) Max A Horlbeck et al. eLife
- ScreenBEAM: a novel meta-analysis algorithm for functional genomics screens via Bayesian hierarchical modeling
- (2015) Jiyang Yu et al. BIOINFORMATICS
- High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities
- (2015) Traver Hart et al. CELL
- CRISPRscan: designing highly efficient sgRNAs for CRISPR-Cas9 targeting in vivo
- (2015) Miguel A Moreno-Mateos et al. NATURE METHODS
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- (2015) T. Wang et al. SCIENCE
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- (2014) T. Hart et al. Molecular Systems Biology
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- (2014) John G Doench et al. NATURE BIOTECHNOLOGY
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- (2013) Hiroko Koike-Yusa et al. NATURE BIOTECHNOLOGY
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- (2012) Anirudh Prahallad et al. NATURE
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- (2011) Paul B. Chapman et al. NEW ENGLAND JOURNAL OF MEDICINE
- NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations
- (2010) M. Valiev et al. COMPUTER PHYSICS COMMUNICATIONS
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