Quantitative deep mapping of the cultured podocyte proteome uncovers shifts in proteostatic mechanisms during differentiation

EPHA2 Blockade Overcomes Acquired Resistance to EGFR Kinase Inhibitors in Lung Cancer

(2016) Katherine R. Amato et al.   CANCER RESEARCH

Three-layered proteomic characterization of a novelACTN4mutation unravels its pathogenic potential in FSGS

(2016) Malte P. Bartram et al.   HUMAN MOLECULAR GENETICS

The ubiquitin ligase Ubr4 controls stability of podocin/MEC-2 supercomplexes

(2016) Markus M. Rinschen et al.   HUMAN MOLECULAR GENETICS

Inhibiting receptor tyrosine kinase AXL with small molecule inhibitor BMS-777607 reduces glioblastoma growth, migration, and invasion in vitro and in vivo

(2016) Julia Onken et al.   Oncotarget

Deep proteomic profiling of vasopressin-sensitive collecting duct cells. I. Virtual Western blots and molecular weight distributions

(2015) Chin-Rang Yang et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

Deep proteomic profiling of vasopressin-sensitive collecting duct cells. II. Bioinformatic analysis of vasopressin signaling

(2015) Chin-Rang Yang et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

Insulin signaling

(2015) Richard Coward et al.   CURRENT OPINION IN NEPHROLOGY AND HYPERTENSION

Genome-Wide Analysis of Wilms' Tumor 1-Controlled Gene Expression in Podocytes Reveals Key Regulatory Mechanisms

(2015) M. Kann et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

A Podocyte-Based Automated Screening Assay Identifies Protective Small Molecules

(2015) H. W. Lee et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

Dexamethasone-dependent modulation of cyclic GMP synthesis in podocytes

(2015) Barbara Lewko et al.   MOLECULAR AND CELLULAR BIOCHEMISTRY

2016 update of the PRIDE database and its related tools

(2015) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Comparative phosphoproteomic analysis of mammalian glomeruli reveals conserved podocin C-terminal phosphorylation as a determinant of slit diaphragm complex architecture

(2015) Markus M. Rinschen et al.   PROTEOMICS

Proteomic analysis of the kidney filtration barrier-Problems and perspectives

(2015) Markus M. Rinschen et al.   Proteomics Clinical Applications

Label-free quantitative proteomic analysis of the YAP/TAZ interactome

(2014) Priyanka Kohli et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

Extra sensory perception

(2014) Jennifer L. Pluznick   CURRENT OPINION IN NEPHROLOGY AND HYPERTENSION

Advances in slit diaphragm signaling

(2014) Laura A. New et al.   CURRENT OPINION IN NEPHROLOGY AND HYPERTENSION

GPR107, a G-protein-coupled Receptor Essential for Intoxication byPseudomonas aeruginosaExotoxin A, Localizes to the Golgi and Is Cleaved by Furin

(2014) Fikadu G. Tafesse et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

ANO10 mutations cause ataxia and coenzyme Q10 deficiency

(2014) Andrea Balreira et al.   JOURNAL OF NEUROLOGY

Glomerular Cell Cross-Talk Influences Composition and Assembly of Extracellular Matrix

(2014) A. Byron et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

Phosphoproteomic Analysis Reveals Regulatory Mechanisms at the Kidney Filtration Barrier

(2014) M. M. Rinschen et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

(2014) Jürgen Cox et al.   MOLECULAR & CELLULAR PROTEOMICS

A draft map of the human proteome

(2014) Min-Sik Kim et al.   NATURE

Mass-spectrometry-based draft of the human proteome

(2014) Mathias Wilhelm et al.   NATURE

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

(2014) Juan A Vizcaíno et al.   NATURE BIOTECHNOLOGY

Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells

(2014) Nils A Kulak et al.   NATURE METHODS

Identification and Characterization of Novel Renal Sensory Receptors

(2014) Premraj Rajkumar et al.   PLoS One

Molecular fingerprinting of the podocyte reveals novel gene and protein regulatory networks

(2013) Melanie Boerries et al.   KIDNEY INTERNATIONAL

Analysis of the Human Tissue-specific Expression by Genome-wide Integration of Transcriptomics and Antibody-based Proteomics

(2013) Linn Fagerberg et al.   MOLECULAR & CELLULAR PROTEOMICS

The Coming Age of Complete, Accurate, and Ubiquitous Proteomes

(2013) Matthias Mann et al.   MOLECULAR CELL

The role of the podocyte in albumin filtration

(2013) Paul Thomas Brinkkoetter et al.   Nature Reviews Nephrology

Cardiorenal syndrome—current understanding and future perspectives

(2013) Branko Braam et al.   Nature Reviews Nephrology

Systems biology in physiology: the vasopressin signaling network in kidney

(2012) Mark A. Knepper   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

Podocyte Biology and Pathogenesis of Kidney Disease

(2012) Jochen Reiser et al.   Annual Review of Medicine

1D and 2D annotation enrichment: a statistical method integrating quantitative proteomics with complementary high-throughput data

(2012) Juergen Cox et al.   BMC BIOINFORMATICS

Comparative Proteomic Analysis of Eleven Common Cell Lines Reveals Ubiquitous but Varying Expression of Most Proteins

(2012) Tamar Geiger et al.   MOLECULAR & CELLULAR PROTEOMICS

Podocyte culture: Tricks of the trade

(2012) LAN NI et al.   NEPHROLOGY

Arhgap24 inactivates Rac1 in mouse podocytes, and a mutant form is associated with familial focal segmental glomerulosclerosis

(2011) Shreeram Akilesh et al.   JOURNAL OF CLINICAL INVESTIGATION

CD2AP in mouse and human podocytes controls a proteolytic program that regulates cytoskeletal structure and cellular survival

(2011) Suma Yaddanapudi et al.   JOURNAL OF CLINICAL INVESTIGATION

System-wide Perturbation Analysis with Nearly Complete Coverage of the Yeast Proteome by Single-shot Ultra HPLC Runs on a Bench Top Orbitrap

(2011) Nagarjuna Nagaraj et al.   MOLECULAR & CELLULAR PROTEOMICS

Deep proteome and transcriptome mapping of a human cancer cell line

(2011) N. Nagaraj et al.   Molecular Systems Biology

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse

(2011) P. V. Hornbeck et al.   NUCLEIC ACIDS RESEARCH

GPR124, an orphan G protein-coupled receptor, is required for CNS-specific vascularization and establishment of the blood-brain barrier

(2011) M. Cullen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Actin-depolymerizing Factor Cofilin-1 Is Necessary in Maintaining Mature Podocyte Architecture

(2010) Puneet Garg et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Enzymatic disease of the podocyte

(2010) Andreas D. Kistler et al.   PEDIATRIC NEPHROLOGY

Quantitative phosphoproteomic analysis reveals vasopressin V2-receptor–dependent signaling pathways in renal collecting duct cells

(2010) Markus M. Rinschen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Improved visualization of protein consensus sequences by iceLogo

(2009) Niklaas Colaert et al.   NATURE METHODS

A new role for the neuronal ubiquitin C-terminal hydrolase-L1 (UCH-L1) in podocyte process formation and podocyte injury in human glomerulopathies

(2008) C Meyer-Schwesinger et al.   JOURNAL OF PATHOLOGY

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Linear Motif Atlas for Phosphorylation-Dependent Signaling

(2008) M. L. Miller et al.   Science Signaling