High-resolution DNA methylome reveals that demethylation enhances adaptability to continuous cropping comprehensive stress in soybean

Genome-wide DNA Methylation analysis in response to salinity in the model plant caliph medic (Medicago truncatula)

(2018) Mahmoud W. Yaish et al.   BMC GENOMICS

Natural variation at the soybean J locus improves adaptation to the tropics and enhances yield

(2017) Sijia Lu et al.   NATURE GENETICS

Editorial: epigenetic regulation of plant development and stress responses

(2017) Tarek Hewezi   PLANT CELL REPORTS

The Arabidopsis DNA Methylome Is Stable under Transgenerational Drought Stress

(2017) Diep R. Ganguly et al.   PLANT PHYSIOLOGY

Critical roles of DNA demethylation in the activation of ripening-induced genes and inhibition of ripening-repressed genes in tomato fruit

(2017) Zhaobo Lang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Control of DEMETER DNA demethylase gene transcription in male and female gamete companion cells inArabidopsis thaliana

(2017) Jin-Sup Park et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Organellar Gene Expression and Acclimation of Plants to Environmental Stress

(2017) Dario Leister et al.   Frontiers in Plant Science

DNA Methylation and Demethylation in Plant Immunity

(2016) A. Deleris et al.   Annual Review of Phytopathology

Role of Base Excision “Repair” Enzymes in Erasing Epigenetic Marks from DNA

(2016) Alexander C. Drohat et al.   CHEMICAL REVIEWS

Novel features of telomere biology revealed by the absence of telomeric DNA methylation

(2016) Alejandro Vega-Vaquero et al.   GENOME RESEARCH

SoyNet: a database of co-functional networks for soybeanGlycine max

(2016) Eiru Kim et al.   NUCLEIC ACIDS RESEARCH

Salinity induced differential methylation patterns in contrasting cultivars of foxtail millet (Setaria italica L.)

(2016) Garima Pandey et al.   PLANT CELL REPORTS

Analyses of the community compositions of root rot pathogenic fungi in the soybean rhizosphere soil

(2016) Jiaqi Cui et al.   Chilean Journal of Agricultural Research

Glutamate, Ornithine, Arginine, Proline, and Polyamine Metabolic Interactions: The Pathway Is Regulated at the Post-Transcriptional Level

(2016) Rajtilak Majumdar et al.   Frontiers in Plant Science

Alternative splicing in plants: directing traffic at the crossroads of adaptation and environmental stress

(2015) Sergei Filichkin et al.   CURRENT OPINION IN PLANT BIOLOGY

From arable land to species-rich semi-natural grasslands: Succession in abandoned fields in a dry region of central Europe

(2015) Martina Sojneková et al.   ECOLOGICAL ENGINEERING

The Methyl-CpG-Binding Protein MBD7 Facilitates Active DNA Demethylation to Limit DNA Hyper-Methylation and Transcriptional Gene Silencing

(2015) Zhaobo Lang et al.   MOLECULAR CELL

Nitric Oxide: A Multitasked Signaling Gas in Plants

(2015) Patricia Domingos et al.   Molecular Plant

DNA methylation pathways and their crosstalk with histone methylation

(2015) Jiamu Du et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Iron deficiency in barley plants: phytosiderophore release, iron translocation, and DNA methylation

(2015) Marika Bocchini et al.   Frontiers in Plant Science

Physiological implications of arginine metabolism in plants

(2015) Gudrun Winter et al.   Frontiers in Plant Science

Sulfur Metabolism and Stress Defense Responses in Plants

(2015) Flávia R. Capaldi et al.   Tropical Plant Biology

Salt Tolerant and Sensitive Rice Varieties Display Differential Methylome Flexibility under Salt Stress

(2015) Liliana J. Ferreira et al.   PLoS One

The evidence for functional non-CpG methylation in mammalian cells

(2014) Vibha Patil et al.   Epigenetics

RNA-directed DNA methylation: an epigenetic pathway of increasing complexity

(2014) Marjori A. Matzke et al.   NATURE REVIEWS GENETICS

The roles of polyamines during the lifespan of plants: from development to stress

(2014) Antonio F. Tiburcio et al.   PLANTA

Polyamines and abiotic stress in plants: a complex relationship1

(2014) Rakesh Minocha et al.   Frontiers in Plant Science

Spatiotemporal Pattern and Driving Forces of Arable Land-Use Intensity in China: Toward Sustainable Land Management Using Emergy Analysis

(2014) Hualin Xie et al.   Sustainability

Polyamines in response to abiotic stress tolerance through transgenic approaches

(2014) Malabika Roy Pathak et al.   GM Crops & Food-Biotechnology in Agriculture and the Food Chain

Plant polyamines in abiotic stress responses

(2013) Kamala Gupta et al.   ACTA PHYSIOLOGIAE PLANTARUM

Endoplasmic Reticulum Stress Responses in Plants

(2013) Stephen H. Howell   Annual Review of Plant Biology

BS-Seeker2: a versatile aligning pipeline for bisulfite sequencing data

(2013) Weilong Guo et al.   BMC GENOMICS

Salicylic Acid and Abiotic Stress Responses in Rice

(2013) M. Pál et al.   JOURNAL OF AGRONOMY AND CROP SCIENCE

Plant-Soil Feedbacks and Soil Sickness: From Mechanisms to Application in Agriculture

(2013) Li-Feng Huang et al.   JOURNAL OF CHEMICAL ECOLOGY

Distribution, recognition and regulation of non-CpG methylation in the adult mammalian brain

(2013) Junjie U Guo et al.   NATURE NEUROSCIENCE

Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression

(2012) Xin Li et al.   BMC GENOMICS

Yield response of continuous soybean to one-season crop disturbance in a previous continuous soybean field in Northeast China

(2012) Xiaobing Liu et al.   FIELD CROPS RESEARCH

Ultra-low-input, tagmentation-based whole-genome bisulfite sequencing

(2012) Andrew Adey et al.   GENOME RESEARCH

Widespread dynamic DNA methylation in response to biotic stress

(2012) R. H. Dowen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA methylation in higher plants: Past, present and future

(2011) Boris F. Vanyushin et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

RNA regulation in plant abiotic stress responses

(2011) Kentaro Nakaminami et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Polyamines: Natural and engineered abiotic and biotic stress tolerance in plants

(2011) Syed Sarfraz Hussain et al.   BIOTECHNOLOGY ADVANCES

Regulation and function of DNA methylation in plants and animals

(2011) Xin-Jian He et al.   CELL RESEARCH

Influence of pH, temperature and the cationic porphyrin TMPyP4 on the stability of the i-motif formed by the 5′-(C3TA2)4-3′ sequence of the human telomere

(2011) Sergio Fernández et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Contribution of Gamma amino butyric acid (GABA) to salt stress responses of Nicotiana sylvestris CMSII mutant and wild type plants

(2011) Neşe Akçay et al.   JOURNAL OF PLANT PHYSIOLOGY

Interactions between Polyamines and Abiotic Stress Pathway Responses Unraveled by Transcriptome Analysis of Polyamine Overproducers

(2011) Francisco Marco et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Phytoextraction of toxic metals: a central role for glutathione

(2011) C. S. SETH et al.   PLANT CELL AND ENVIRONMENT

Glutathione in plants: an integrated overview

(2011) GRAHAM NOCTOR et al.   PLANT CELL AND ENVIRONMENT

Synteny mapping between common bean and soybean reveals extensive blocks of shared loci

(2010) Phillip E McClean et al.   BMC GENOMICS

The DNA methylome

(2010) Mattia Pelizzola et al.   FEBS LETTERS

Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.)

(2010) Wen-Sheng Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

DNA cytosine methylation in plant development

(2010) Meishan Zhang et al.   Journal of Genetics and Genomics

Salicylic acid alleviates decreases in photosynthesis under salt stress by enhancing nitrogen and sulfur assimilation and antioxidant metabolism differentially in two mungbean cultivars

(2010) Rahat Nazar et al.   JOURNAL OF PLANT PHYSIOLOGY

Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications

(2010) R Alan Harris et al.   NATURE BIOTECHNOLOGY

Single base–resolution methylome of the silkworm reveals a sparse epigenomic map

(2010) Hui Xiang et al.   NATURE BIOTECHNOLOGY

Arabidopsis thaliana telomeres exhibit euchromatic features

(2010) María I. Vaquero-Sedas et al.   NUCLEIC ACIDS RESEARCH

Endoplasmic Reticulum Protein Quality Control and Its Relationship to Environmental Stress Responses in Plants

(2010) Jian-Xiang Liu et al.   PLANT CELL

Understanding Oxidative Stress and Antioxidant Functions to Enhance Photosynthesis

(2010) C. H. Foyer et al.   PLANT PHYSIOLOGY

Active DNA Demethylation Mediated by DNA Glycosylases

(2009) Jian-Kang Zhu   Annual Review of Genetics

Fatty Acid–Derived Signals in Plant Defense

(2009) Aardra Kachroo et al.   Annual Review of Phytopathology

Epigenetic regulation of stress responses in plants

(2009) Viswanathan Chinnusamy et al.   CURRENT OPINION IN PLANT BIOLOGY

A ‘higher order’ of telomere regulation: telomere heterochromatin and telomeric RNAs

(2009) Stefan Schoeftner et al.   EMBO JOURNAL

Human DNA methylomes at base resolution show widespread epigenomic differences

(2009) Ryan Lister et al.   NATURE

Stress-induced DNA methylation changes and their heritability in asexual dandelions

(2009) Koen J. F. Verhoeven et al.   NEW PHYTOLOGIST

Effect of monoculture soybean on soil microbial community in the Northeast China

(2009) Chunge Li et al.   PLANT AND SOIL

Large-scale bioenergy production from soybeans and switchgrass in Argentina

(2009) J. van Dam et al.   RENEWABLE & SUSTAINABLE ENERGY REVIEWS

Fatty acid unsaturation, mobilization, and regulation in the response of plants to stress

(2008) Robert G. Upchurch   BIOTECHNOLOGY LETTERS

Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis

(2008) Ryan Lister et al.   CELL

Genotoxic stress in plants: Shedding light on DNA damage, repair and DNA repair helicases

(2008) Narendra Tuteja et al.   MUTATION RESEARCH-REVIEWS IN MUTATION RESEARCH

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

(2008) Shawn J. Cokus et al.   NATURE

Epigenetic control of plant stress response

(2007) Alex Boyko et al.   ENVIRONMENTAL AND MOLECULAR MUTAGENESIS