Genome plasticity favours double chromosomal Tn4401b-blaKPC-2 transposon insertion in the Pseudomonas aeruginosa ST235 clone

Pseudomonas aeruginosa Isolates from Spanish Children: Occurrence in Faecal Samples, Antimicrobial Resistance, Virulence, and Molecular Typing

(2018) Lidia Ruiz-Roldán et al.   Biomed Research International

Genomic Epidemiology of NDM-1-Encoding Plasmids in Latin American Clinical Isolates Reveals Insights into the Evolution of Multidrug Resistance

(2017) Ricaurte Alejandro Marquez-Ortiz et al.   Genome Biology and Evolution

Experimental Induction of Bacterial Resistance to the Antimicrobial Peptide Tachyplesin I and Investigation of the Resistance Mechanisms

(2016) Jun Hong et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Characterization of carbapenem resistance mechanisms and integrons in Pseudomonas aeruginosa strains from blood samples in a French hospital

(2016) Beatriz Rojo-Bezares et al.   JOURNAL OF MEDICAL MICROBIOLOGY

PHASTER: a better, faster version of the PHAST phage search tool

(2016) David Arndt et al.   NUCLEIC ACIDS RESEARCH

Occurrence of co-existing bla VIM-2 and bla NDM-1 in clinical isolates of Pseudomonas aeruginosa from India

(2016) Deepjyoti Paul et al.   Annals of Clinical Microbiology and Antimicrobials

Roary: rapid large-scale prokaryote pan genome analysis

(2015) Andrew J. Page et al.   BIOINFORMATICS

Identification of VIM-2-Producing Pseudomonas aeruginosa from Tanzania Is Associated with Sequence Types 244 and 640 and the Location ofblaVIM-2in a TniC Integron

(2014) Sabrina Moyo et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

The Resistome of Pseudomonas aeruginosa in Relationship to Phenotypic Susceptibility

(2014) Veronica N. Kos et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, Colombia

(2014) J. M. Vanegas et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Establishment and multi drug resistance evolution of ST235 Pseudomonas aeruginosa strains in the intensive care unit of a Colombian hospital

(2014) Elena Martinez et al.   RESEARCH IN MICROBIOLOGY

Pseudomonas aeruginosa resistente a antimicrobianos en hospitales colombianos

(2014) Lina M Villa et al.   Revista Chilena de Infectologia

The Comprehensive Antibiotic Resistance Database

(2013) Andrew G. McArthur et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

ARG-ANNOT, a New Bioinformatic Tool To Discover Antibiotic Resistance Genes in Bacterial Genomes

(2013) Sushim Kumar Gupta et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Carbapenemase-producing Pseudomonas aeruginosafrom central Greece: molecular epidemiology and genetic analysis of class I integrons

(2013) Apostolos Liakopoulos et al.   BMC INFECTIOUS DISEASES

Dissemination of metallo- -lactamase-producing Pseudomonas aeruginosa of sequence type 235 in Asian countries

(2013) M. J. Kim et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Complete sequence of two KPC-harbouring plasmids from Pseudomonas aeruginosa

(2013) T. Naas et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Spread of extensively resistant VIM-2-positive ST235 Pseudomonas aeruginosa in Belarus, Kazakhstan, and Russia: a longitudinal epidemiological and clinical study

(2013) Mikhail V Edelstein et al.   LANCET INFECTIOUS DISEASES

First Report of KPC-Producing Pseudomonas aeruginosa in Brazil

(2012) Paula Regina Luna de Araújo Jácome et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Role of ISKpn7and Deletions inblaKPCGene Expression

(2012) Thierry Naas et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Using Tablet for visual exploration of second-generation sequencing data

(2012) I. Milne et al.   BRIEFINGS IN BIOINFORMATICS

Deletion and acquisition of genomic content during early stage adaptation of Pseudomonas aeruginosa to a human host environment

(2012) Martin H. Rau et al.   ENVIRONMENTAL MICROBIOLOGY

Identification of acquired antimicrobial resistance genes

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks

(2012) Daniel H. Huson et al.   SYSTEMATIC BIOLOGY

Carbapenem resistance in Enterobacteriaceae: here is the storm!

(2012) Patrice Nordmann et al.   TRENDS IN MOLECULAR MEDICINE

Functional Characterization of Tn4401, a Tn3-Based Transposon Involved inblaKPCGene Mobilization

(2011) Gaelle Cuzon et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Detection of the KPC Gene in Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Acinetobacter baumannii during a PCR-Based Nosocomial Surveillance Study in Puerto Rico

(2011) Iraida E. Robledo et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Easyfig: a genome comparison visualizer

(2011) M. J. Sullivan et al.   BIOINFORMATICS

Identification of KPC-2-producing Pseudomonas aeruginosa isolates in China

(2011) C. Ge et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Pseudomonas Aeruginosa: Resistance to the Max

(2011) Keith Poole   Frontiers in Microbiology

Emergence of KPC-Producing Pseudomonas aeruginosa in the United States

(2010) L. Poirel et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

Genetic Organization of Transposase Regions Surrounding blaKPC Carbapenemase Genes on Plasmids from Klebsiella Strains Isolated in a New York City Hospital

(2009) T. D. Gootz et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

IslandViewer: an integrated interface for computational identification and visualization of genomic islands

(2009) M. G. I. Langille et al.   BIOINFORMATICS

Emergence of KPC-Producing Pseudomonas aeruginosa in Trinidad and Tobago

(2009) P. E. Akpaka et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Genomic islands ofPseudomonas aeruginosa

(2008) Scott E. Battle et al.   FEMS MICROBIOLOGY LETTERS

Hybrid Pathogenicity Island PAGI-5 Contributes to the Highly Virulent Phenotype of a Pseudomonas aeruginosa Isolate in Mammals

(2008) S. E. Battle et al.   JOURNAL OF BACTERIOLOGY

Transmembrane topology of the Acr3 family arsenite transporter from Bacillus subtilis

(2007) Emil K.J. Aaltonen et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES