14-3-3-Pred: improved methods to predict 14-3-3-binding phosphopeptides

Neural Networks inRUsing the Stuttgart Neural Network Simulator:RSNNS

(2015) Christoph Bergmeir et al.   Journal of Statistical Software

ANIA: ANnotation and Integrated Analysis of the 14-3-3 interactome

(2014) Michele Tinti et al.   Database-The Journal of Biological Databases and Curation

Proteomic Screening for Rho-kinase Substrates by Combining Kinase and Phosphatase Inhibitors with 14-3-3ζ Affinity Chromatography

(2012) Tomoki Nishioka et al.   CELL STRUCTURE AND FUNCTION

Protein structure as a means to triage proposed PTM sites

(2012) Elien Vandermarliere et al.   PROTEOMICS

Plant 14-3-3 proteins as spiders in a web of phosphorylation

(2012) Albertus H. de Boer et al.   PROTOPLASMA

Evolution of signal multiplexing by 14-3-3-binding 2R-ohnologue protein families in the vertebrates

(2012) M. Tinti et al.   Open Biology

Java bioinformatics analysis web services for multiple sequence alignment--JABAWS:MSA

(2011) P. V. Troshin et al.   BIOINFORMATICS

2R and remodeling of vertebrate signal transduction engine

(2011) Lukasz Huminiecki et al.   BMC BIOLOGY

Visualization and Biochemical Analyses of the Emerging Mammalian 14-3-3-Phosphoproteome

(2011) Catherine Johnson et al.   MOLECULAR & CELLULAR PROTEOMICS

Toward an understanding of the protein interaction network of the human liver

(2011) J. Wang et al.   Molecular Systems Biology

Structural basis of 14-3-3 protein functions

(2011) Tomas Obsil et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Bioinformatic and experimental survey of 14-3-3-binding sites

(2010) Catherine Johnson et al.   BIOCHEMICAL JOURNAL

Identification of New Substrates of the Protein-tyrosine Phosphatase PTP1B by Bayesian Integration of Proteome Evidence

(2010) Emanuela Ferrari et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Robust Protocol to Map Binding Sites of the 14-3-3 Interactome: Cdc25C Requires Phosphorylation of Both S216 and S263 to bind 14-3-3

(2010) Perry M. Chan et al.   MOLECULAR & CELLULAR PROTEOMICS

Ohnologs in the human genome are dosage balanced and frequently associated with disease

(2010) T. Makino et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Combining peptide recognition specificity and context information for the prediction of the 14-3-3-mediated interactome in S. cerevisiae and H. sapiens

(2010) Simona Panni et al.   PROTEOMICS

ROC analysis: applications to the classification of biological sequences and 3D structures

(2008) P. Sonego et al.   BRIEFINGS IN BIOINFORMATICS

The Jpred 3 secondary structure prediction server

(2008) C. Cole et al.   NUCLEIC ACIDS RESEARCH

PIPs: human protein-protein interaction prediction database

(2008) M. D. McDowall et al.   NUCLEIC ACIDS RESEARCH

Linear Motif Atlas for Phosphorylation-Dependent Signaling

(2008) M. L. Miller et al.   Science Signaling

Support Vector Machines and Kernels for Computational Biology

(2008) Asa Ben-Hur et al.   PLoS Computational Biology