Computational modeling of development by epithelia, mesenchyme and their interactions: a unified model

LBIBCell: a cell-based simulation environment for morphogenetic problems

(2015) Simon Tanaka et al.   BIOINFORMATICS

The cell behavior ontology: describing the intrinsic biological behaviors of real and model cells seen as active agents

(2014) James P. Sluka et al.   BIOINFORMATICS

Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology

(2014) Jörn Starruß et al.   BIOINFORMATICS

The origin and loss of periodic patterning in the turtle shell

(2014) J. E. Moustakas-Verho et al.   DEVELOPMENT

Early inductive events in ectodermal appendage morphogenesis

(2014) Leah C. Biggs et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Influence of Cell Geometry on Division-Plane Positioning

(2011) Nicolas Minc et al.   CELL

Incorporating chemical signalling factors into cell-based models of growing epithelial tissues

(2011) Aaron M. Smith et al.   JOURNAL OF MATHEMATICAL BIOLOGY

A computational model of teeth and the developmental origins of morphological variation

(2010) Isaac Salazar-Ciudad et al.   NATURE

VirtualLeaf: An Open-Source Framework for Cell-Based Modeling of Plant Tissue Growth and Development

(2010) R. M. H. Merks et al.   PLANT PHYSIOLOGY

Chaste: A test-driven approach to software development for biological modelling

(2009) Joe Pitt-Francis et al.   COMPUTER PHYSICS COMMUNICATIONS