The cell behavior ontology: describing the intrinsic biological behaviors of real and model cells seen as active agents

Logical Development of the Cell Ontology

(2011) Terrence F Meehan et al.   BMC BIOINFORMATICS

Modelling the role of the basement membrane beneath a growing epithelial monolayer

(2011) Sara-Jane Dunn et al.   JOURNAL OF THEORETICAL BIOLOGY

BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications

(2011) P. L. Whetzel et al.   NUCLEIC ACIDS RESEARCH

Physical Properties of Biological Entities: An Introduction to the Ontology of Physics for Biology

(2011) Daniel L. Cook et al.   PLoS One

Annotation of SBML models through rule-based semantic integration

(2010) Allyson L Lister et al.   Journal of Biomedical Semantics

FieldML: concepts and implementation

(2009) G. R. Christie et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

3D Multi-Cell Simulation of Tumor Growth and Angiogenesis

(2009) Abbas Shirinifard et al.   PLoS One

OpenAlea: a visual programming and component-based software platform for plant modelling

(2008) Christophe Pradal et al.   FUNCTIONAL PLANT BIOLOGY

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH