Defensin-like peptides in wheat analyzed by whole-transcriptome sequencing: a focus on structural diversity and role in induced resistance

Transcriptome analysis of Brassica juncea var. tumida Tsen responses to Plasmodiophora brassicae primed by the biocontrol strain Zhihengliuella aestuarii

(2018) Yuanli Luo et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Gene expression analysis, subcellular localization, and in planta antimicrobial activity of rice ( Oryza sativa L.) defensin 7 and 8

(2018) Kamonwan Weerawanich et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The evolution, function and mechanisms of action for plant defensins

(2018) Kathy Parisi et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Antifungal plant defensins: increased insight in their mode of action as a basis for their use to combat fungal infections

(2017) Tanne L Cools et al.   Future Microbiology

A Comprehensive Analysis of RALF Proteins in Green Plants Suggests There Are Two Distinct Functional Groups

(2017) Liam Campbell et al.   Frontiers in Plant Science

Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize

(2017) Vívian de Jesus Miranda et al.   Scientific Reports

IPC – Isoelectric Point Calculator

(2016) Lukasz P. Kozlowski   Biology Direct

The cold-induced defensin TAD1 confers resistance against snow mold and Fusarium head blight in transgenic wheat

(2016) Kentaro Sasaki et al.   JOURNAL OF BIOTECHNOLOGY

Evolution of the defensin-like gene family in grass genomes

(2016) JIANDONG WU et al.   JOURNAL OF GENETICS

The Defensins Consist of Two Independent, Convergent Protein Superfamilies

(2016) Thomas M. A. Shafee et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Innate Immune Signaling System as a Regulator of Disease Resistance and Induced Systemic Resistance Activity Against Verticillium dahliae

(2016) Danai Gkizi et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Two novel antimicrobial defensins from rice identified by gene coexpression network analyses

(2016) Supaluk Tantong et al.   PEPTIDES

Antimicrobial nodule-specific cysteine-rich peptides disturb the integrity of bacterial outer and inner membranes and cause loss of membrane potential

(2016) Kata R. Mikuláss et al.   Annals of Clinical Microbiology and Antimicrobials

Identification of a Novel Small Cysteine-Rich Protein in the Fraction from the Biocontrol Fusarium oxysporum Strain CS-20 that Mitigates Fusarium Wilt Symptoms and Triggers Defense Responses in Tomato

(2016) Larisa A. Shcherbakova et al.   Frontiers in Plant Science

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Identification of protein coding regions in RNA transcripts

(2015) Shiyuyun Tang et al.   NUCLEIC ACIDS RESEARCH

Prediction of Leymus arenarius (L.) antimicrobial peptides based on de novo transcriptome assembly

(2015) Anna A. Slavokhotova et al.   PLANT MOLECULAR BIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The C-terminal propeptide of a plant defensin confers cytoprotective and subcellular targeting functions

(2014) Fung T Lay et al.   BMC PLANT BIOLOGY

Antifungal Plant Defensins: Mechanisms of Action and Production

(2014) Kim Vriens et al.   MOLECULES

Identification of small secreted peptides (SSPs) in maize and expression analysis of partial SSP genes in reproductive tissues

(2014) Ye Long Li et al.   PLANTA

Shedding Some Light over the Floral Metabolism by Arum Lily (Zantedeschia aethiopica) Spathe De Novo Transcriptome Assembly

(2014) Elizabete de Souza Cândido et al.   PLoS One

Analysis of plant microbe interactions in the era of next generation sequencing technologies

(2014) Claudia Knief   Frontiers in Plant Science

Detecting small plant peptides using SPADA (Small Peptide Alignment Discovery Application)

(2013) Peng Zhou et al.   BMC BIOINFORMATICS

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

CS-AMPPred: An Updated SVM Model for Antimicrobial Activity Prediction in Cysteine-Stabilized Peptides

(2012) William F. Porto et al.   PLoS One

Barley Leaf Transcriptome and Metabolite Analysis Reveals New Aspects of Compatibility and Piriformospora indica–Mediated Systemic Induced Resistance to Powdery Mildew

(2011) Alexandra Molitor et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Fusarium sambucinum isolate FS-94 induces resistance against fusarium wilt of tomato via activation and priming of a salicylic acid-dependent signaling system

(2011) L. A. Shcherbakova et al.   RUSSIAN JOURNAL OF PLANT PHYSIOLOGY

Molecular aspects of defence priming

(2011) Uwe Conrath   TRENDS IN PLANT SCIENCE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

PDC1, a corn defensin peptide expressed in Escherichia coli and Pichia pastoris inhibits growth of Fusarium graminearum

(2009) Pragya Kant et al.   PEPTIDES

Plant defensins—Prospects for the biological functions and biotechnological properties

(2009) André de Oliveira Carvalho et al.   PEPTIDES

A defensin from tomato with dual function in defense and development

(2009) Henrik U. Stotz et al.   PLANT MOLECULAR BIOLOGY

Seed defensins of barnyard grass Echinochloa crusgalli (L.) Beauv.

(2008) Tatyana I. Odintsova et al.   BIOCHIMIE

Induction of systemic resistance inArabidopsis thalianain response to a culture filtrate from a plant growth-promoting fungus,Phomasp. GS8-3

(2008) F. Sultana et al.   PLANT BIOLOGY