Rhinoceros beetle horn development reveals deep parallels with dung beetles

Salmon provides fast and bias-aware quantification of transcript expression

(2017) Rob Patro et al.   NATURE METHODS

Complex furrows in a 2D epithelial sheet code the 3D structure of a beetle horn

(2017) Keisuke Matsuda et al.   Scientific Reports

The nature of non-appendicular anterior paired projections in Palaeozoic total-group Euarthropoda

(2016) Javier Ortega-Hernández et al.   ARTHROPOD STRUCTURE & DEVELOPMENT

Near-optimal probabilistic RNA-seq quantification

(2016) Nicolas L Bray et al.   NATURE BIOTECHNOLOGY

Neofunctionalization of embryonic head patterning genes facilitates the positioning of novel traits on the dorsal head of adult beetles

(2016) Eduardo E. Zattara et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology

(2015) Christian Schmitt-Engel et al.   Nature Communications

The evolution of scarab beetles tracks the sequential rise of angiosperms and mammals

(2014) D. Ahrens et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Phylogeny and evolution of Staphyliniformia and Scarabaeiformia: forest litter as a stepping stone for diversification of nonphytophagous beetles

(2014) DUANE D. MCKENNA et al.   SYSTEMATIC ENTOMOLOGY

Developmental Link between Sex and Nutrition; doublesex Regulates Sex-Specific Mandible Growth via Juvenile Hormone Signaling in Stag Beetles

(2014) Hiroki Gotoh et al.   PLoS Genetics

TCC: an R package for comparing tag count data with robust normalization strategies

(2013) Jianqiang Sun et al.   BMC BIOINFORMATICS

The role of doublesex in the evolution of exaggerated horns in the Japanese rhinoceros beetle

(2013) Yuta Ito et al.   EMBO REPORTS

Insect Morphological Diversification Through the Modification of Wing Serial Homologs

(2013) T. Ohde et al.   SCIENCE

Diversification of doublesex function underlies morph-, sex-, and species-specific development of beetle horns

(2012) T. Kijimoto et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancestral Developmental Potential Facilitates Parallel Evolution in Ants

(2012) R. Rajakumar et al.   SCIENCE

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

RE-EVOLUTION OF LOST MANDIBULAR TEETH IN FROGS AFTER MORE THAN 200 MILLION YEARS, AND RE-EVALUATING DOLLO'S LAW

(2011) John J. Wiens   EVOLUTION

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

Candidate Gene Screen in the Red Flour Beetle Tribolium Reveals Six3 as Ancient Regulator of Anterior Median Head and Central Complex Development

(2011) Nico Posnien et al.   PLoS Genetics

Genetics, development and composition of the insect head – A beetle’s view

(2010) Nico Posnien et al.   ARTHROPOD STRUCTURE & DEVELOPMENT

A clustered set of three Sp-family genes is ancestral in the Metazoa: evidence from sequence analysis, protein domain structure, developmental expression patterns and chromosomal location

(2010) Nina D Schaeper et al.   BMC EVOLUTIONARY BIOLOGY

Functional analysis of Scr during embryonic and post-embryonic development in the cockroach, Periplaneta americana

(2010) Steven Hrycaj et al.   DEVELOPMENTAL BIOLOGY

Sox14 is required for transcriptional and developmental responses to 20-hydroxyecdysone at the onset of drosophila metamorphosis

(2010) Amanda R. Ritter et al.   DEVELOPMENTAL DYNAMICS

Programed cell death shapes the expression of horns within and between species of horned beetles

(2010) Teiya Kijimoto et al.   EVOLUTION & DEVELOPMENT

Beetle horns are regulated by the Hox gene, Sex combs reduced, in a species- and sex-specific manner

(2010) Bethany R. Wasik et al.   EVOLUTION & DEVELOPMENT

Non-Redundant Selector and Growth-Promoting Functions of Two Sister Genes, buttonhead and Sp1, in Drosophila Leg Development

(2010) Carlos Estella et al.   PLoS Genetics

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

A conserved function of the zinc finger transcription factor Sp8/9 in allometric appendage growth in the milkweed bug Oncopeltus fasciatus

(2009) Nina D. Schaeper et al.   DEVELOPMENT GENES AND EVOLUTION

Diverging functions of Scr between embryonic and post-embryonic development in a hemimetabolous insect, Oncopeltus fasciatus

(2009) John Chesebro et al.   DEVELOPMENTAL BIOLOGY

Formation of the insect head involves lateral contribution of the intercalary segment, which depends on Tc-labial function

(2009) Nico Posnien et al.   DEVELOPMENTAL BIOLOGY

The insect upper lip (labrum) is a nonsegmental appendage-like structure

(2009) Nico Posnien et al.   EVOLUTION & DEVELOPMENT

Differential recruitment of limb patterning genes during development and diversification of beetle horns

(2009) A. P. Moczek et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

On the origins of novelty in development and evolution

(2008) Armin P. Moczek   BIOESSAYS

The genome of the model beetle and pest Tribolium castaneum

(2008) Stephen Richards et al.   NATURE