- Home
- Publications
- Publication Search
- Publication Details
Title
Genetic exchanges are more frequent in bacteria encoding capsules
Authors
Keywords
Phylogenetics, Horizontal gene transfer, Genetic loci, Phylogenetic analysis, Genomic databases, Microbial genetics, Antibiotic resistance, Homologous recombination
Journal
PLoS Genetics
Volume 14, Issue 12, Pages e1007862
Publisher
Public Library of Science (PLoS)
Online
2018-12-22
DOI
10.1371/journal.pgen.1007862
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Exopolysaccharide production in Caulobacter crescentus: A resource allocation trade-off between protection and proliferation
- (2018) Kathryn L. Herr et al. PLoS One
- Resistance gene transfer: induction of transducing phage by sub-inhibitory concentrations of antimicrobials is not correlated to induction of lytic phage
- (2017) Kinga I. Stanczak-Mrozek et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Pneumococcal Capsule Synthesis Locus cps as Evolutionary Hotspot with Potential to Generate Novel Serotypes by Recombination
- (2017) Rafał J. Mostowy et al. MOLECULAR BIOLOGY AND EVOLUTION
- The Rcs-Regulated Colanic Acid Capsule Maintains Membrane Potential in Salmonella enterica serovar Typhimurium
- (2017) Jasmine M. Pando et al. mBio
- Inhibition of NHEJ repair by type II-A CRISPR-Cas systems in bacteria
- (2017) Aude Bernheim et al. Nature Communications
- Abundance and co-occurrence of extracellular capsules increase environmental breadth: Implications for the emergence of pathogens
- (2017) Olaya Rendueles et al. PLoS Pathogens
- Two T7-like Bacteriophages, K5-2 and K5-4, Each Encodes Two Capsule Depolymerases: Isolation and Functional Characterization
- (2017) Pei-Fang Hsieh et al. Scientific Reports
- Dissecting the effects of antibiotics on horizontal gene transfer: Analysis suggests a critical role of selection dynamics
- (2016) Allison J. Lopatkin et al. BIOESSAYS
- Genomic Investigation Reveals Highly Conserved, Mosaic, Recombination Events Associated with Capsular Switching among InvasiveNeisseria meningitidisSerogroup W Sequence Type (ST)-11 Strains
- (2016) Mustapha M. Mustapha et al. Genome Biology and Evolution
- Addiction of Hypertransformable Pneumococcal Isolates to Natural Transformation forIn VivoFitness and Virulence
- (2016) Guiling Li et al. INFECTION AND IMMUNITY
- Identification and analysis of integrons and cassette arrays in bacterial genomes
- (2016) Jean Cury et al. NUCLEIC ACIDS RESEARCH
- CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
- (2016) Baofeng Jia et al. NUCLEIC ACIDS RESEARCH
- CRISPR-Cas: biology, mechanisms and relevance
- (2016) Frank Hille et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Regulation of genetic flux between bacteria by restriction–modification systems
- (2016) Pedro H. Oliveira et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Recombination in Streptococcus pneumoniae Lineages Increase with Carriage Duration and Size of the Polysaccharide Capsule
- (2016) Chrispin Chaguza et al. mBio
- Extensive Capsule Locus Variation and Large-Scale Genomic Recombination within the Klebsiella pneumoniae Clonal Group 258
- (2015) Kelly L. Wyres et al. Genome Biology and Evolution
- Phenotypic Heterogeneity in Expression of the K1 Polysaccharide Capsule of Uropathogenic Escherichia coli and Downregulation of the Capsule Genes during Growth in Urine
- (2015) Jane E. King et al. INFECTION AND IMMUNITY
- No evidence of inhibition of horizontal gene transfer by CRISPR–Cas on evolutionary timescales
- (2015) Uri Gophna et al. ISME Journal
- Bistability in a Metabolic Network Underpins the De Novo Evolution of Colony Switching in Pseudomonas fluorescens
- (2015) Jenna Gallie et al. PLOS BIOLOGY
- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
- (2015) Xavier Didelot et al. PLoS Computational Biology
- Capsules, Toxins and AtxA as Virulence Factors of Emerging Bacillus cereus Biovar anthracis
- (2015) Christophe Brézillon et al. PLoS Neglected Tropical Diseases
- Antibiotic Modulation of Capsular Exopolysaccharide and Virulence in Acinetobacter baumannii
- (2015) Edward Geisinger et al. PLoS Pathogens
- A point mutation in cpsE renders Streptococcus pneumoniae nonencapsulated and enhances its growth, adherence and competence
- (2014) Thierry O Schaffner et al. BMC MICROBIOLOGY
- The Genomic Diversification of the Whole Acinetobacter Genus: Origins, Mechanisms, and Consequences
- (2014) Marie Touchon et al. Genome Biology and Evolution
- Improved annotation of antibiotic resistance determinants reveals microbial resistomes cluster by ecology
- (2014) Molly K Gibson et al. ISME Journal
- Prospects for Building Large Timetrees Using Molecular Data with Incomplete Gene Coverage among Species
- (2014) A. Filipski et al. MOLECULAR BIOLOGY AND EVOLUTION
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Dense genomic sampling identifies highways of pneumococcal recombination
- (2014) Claire Chewapreecha et al. NATURE GENETICS
- Bacterial transformation: distribution, shared mechanisms and divergent control
- (2014) Calum Johnston et al. NATURE REVIEWS MICROBIOLOGY
- MacSyFinder: A Program to Mine Genomes for Molecular Systems with an Application to CRISPR-Cas Systems
- (2014) Sophie S. Abby et al. PLoS One
- ARG-ANNOT, a New Bioinformatic Tool To Discover Antibiotic Resistance Genes in Bacterial Genomes
- (2013) Sushim Kumar Gupta et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Clinical relevance of the ESKAPE pathogens
- (2013) Jack N Pendleton et al. Expert Review of Anti-Infective Therapy
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Antibiofilm polysaccharides
- (2012) Olaya Rendueles et al. ENVIRONMENTAL MICROBIOLOGY
- Identification of acquired antimicrobial resistance genes
- (2012) E. Zankari et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Variation at the capsule locus, cps, of mistyped and non-typable Streptococcus pneumoniae isolates
- (2012) S. J. Salter et al. MICROBIOLOGY-SGM
- Evolution of Conjugation and Type IV Secretion Systems
- (2012) Julien Guglielmini et al. MOLECULAR BIOLOGY AND EVOLUTION
- High Levels of Genetic Recombination during Nasopharyngeal Carriage and Biofilm Formation in Streptococcus pneumoniae
- (2012) L. R. Marks et al. mBio
- Patterns of Gene Flow Define Species of Thermophilic Archaea
- (2012) Hinsby Cadillo-Quiroz et al. PLOS BIOLOGY
- Loss of capsule among Streptococcus suis isolates from porcine endocarditis and its biological significance
- (2011) N. Lakkitjaroen et al. JOURNAL OF MEDICAL MICROBIOLOGY
- Sequence analysis of serotype-specific synthesis regions II of Haemophilus influenzae serotypes c and d: evidence for common ancestry of capsule synthesis in Pasteurellaceae and Neisseria meningitidis
- (2011) Thiên-Trí Lâm et al. RESEARCH IN MICROBIOLOGY
- Screening of Escherichia coli Species Biodiversity Reveals New Biofilm-Associated Antiadhesion Polysaccharides
- (2011) O. Rendueles et al. mBio
- phytools: an R package for phylogenetic comparative biology (and other things)
- (2011) Liam J. Revell Methods in Ecology and Evolution
- Recombination and Population Structure in Salmonella enterica
- (2011) Xavier Didelot et al. PLoS Genetics
- Horizontal Gene Exchange in Environmental Microbiota
- (2011) Rustam I. Aminov Frontiers in Microbiology
- Capsules ofStreptococcus pneumoniaeand Other Bacteria: Paradigms for Polysaccharide Biosynthesis and Regulation
- (2010) Janet Yother Annual Review of Microbiology
- Count: evolutionary analysis of phylogenetic profiles with parsimony and likelihood
- (2010) M. Csuos BIOINFORMATICS
- phangorn: phylogenetic analysis in R
- (2010) Klaus Peter Schliep BIOINFORMATICS
- Mobility of Plasmids
- (2010) C. Smillie et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Call of the wild: antibiotic resistance genes in natural environments
- (2010) Heather K. Allen et al. NATURE REVIEWS MICROBIOLOGY
- Mechanism of chromosomal transfer of Enterococcus faecalis pathogenicity island, capsule, antimicrobial resistance, and other traits
- (2010) J. M. Manson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
- (2009) S. Capella-Gutierrez et al. BIOINFORMATICS
- Roles of lipooligosaccharide and capsular polysaccharide in antimicrobial resistance and natural transformation of Campylobacter jejuni
- (2009) Byeonghwa Jeon et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
- (2009) M. N. Price et al. MOLECULAR BIOLOGY AND EVOLUTION
- Phylogenetic Logistic Regression for Binary Dependent Variables
- (2009) Anthony R. Ives et al. SYSTEMATIC BIOLOGY
- Capsule enlargement inCryptococcus neoformansconfers resistance to oxidative stress suggesting a mechanism for intracellular survival
- (2008) Oscar Zaragoza et al. CELLULAR MICROBIOLOGY
- A comparison of homologous recombination rates in bacteria and archaea
- (2008) Michiel Vos et al. ISME Journal
- Capsule polysaccharide is a bacterial decoy for antimicrobial peptides
- (2008) E. Llobet et al. MICROBIOLOGY-SGM
- Genetic exchange and the origin of adaptations: prokaryotes to primates
- (2008) M. L Arnold et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started