Polynucleotide phosphorylase: Not merely an RNase but a pivotal post-transcriptional regulator
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Title
Polynucleotide phosphorylase: Not merely an RNase but a pivotal post-transcriptional regulator
Authors
Keywords
Ribonucleases, Mitochondria, Non-coding RNA sequences, Ribosomal RNA, RNA synthesis, RNA structure, Polynucleotides, Cytoplasm
Journal
PLoS Genetics
Volume 14, Issue 10, Pages e1007654
Publisher
Public Library of Science (PLoS)
Online
2018-10-12
DOI
10.1371/journal.pgen.1007654
References
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Note: Only part of the references are listed.- PNPT1 Release from Mitochondria during Apoptosis Triggers Decay of Poly(A) RNAs
- (2018) Xing Liu et al. CELL
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- (2018) Kumari Kavita et al. CURRENT OPINION IN MICROBIOLOGY
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- (2018) Eriko Shimada et al. PLoS One
- Mitochondrial transcription in mammalian cells
- (2017) Mikhail F Alexeyev Frontiers in Bioscience-Landmark
- Defective mitochondrial RNA processing due to PNPT1 variants causes Leigh syndrome
- (2017) Sanna Matilainen et al. HUMAN MOLECULAR GENETICS
- Exploring the mitochondrial microRNA import pathway through Polynucleotide Phosphorylase (PNPase)
- (2017) Danielle L. Shepherd et al. JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY
- Alternative pathways for Escherichia coli biofilm formation revealed by sRNA overproduction
- (2017) Ashley Parker et al. MOLECULAR MICROBIOLOGY
- Structure of the Escherichia coli ProQ RNA-binding protein
- (2017) Grecia M. Gonzalez et al. RNA
- Small RNA interactome of pathogenic E. coli revealed through crosslinking of RNase E
- (2016) Shafagh A Waters et al. EMBO JOURNAL
- Whole-exome sequencing identifies novel variants in PNPT1 causing oxidative phosphorylation defects and severe multisystem disease
- (2016) Ahmad Alodaib et al. EUROPEAN JOURNAL OF HUMAN GENETICS
- Neisseria meningitidis Polynucleotide Phosphorylase Affects Aggregation, Adhesion, and Virulence
- (2016) Jakob Engman et al. INFECTION AND IMMUNITY
- Small RNA Regulation of TolC, the Outer Membrane Component of Bacterial Multidrug Transporters
- (2016) Ashley Parker et al. JOURNAL OF BACTERIOLOGY
- The Small RNA GcvB Promotes Mutagenic Break Repair by Opposing the Membrane Stress Response
- (2016) Brittany Barreto et al. JOURNAL OF BACTERIOLOGY
- The Phosphorolytic Exoribonucleases Polynucleotide Phosphorylase and RNase PH Stabilize sRNAs and Facilitate Regulation of Their mRNA Targets
- (2016) Todd A. Cameron et al. JOURNAL OF BACTERIOLOGY
- Endonucleolytic cleavages by RNase E generate the mature 3′ termini of the three proline tRNAs inEscherichia coli
- (2016) Bijoy K. Mohanty et al. NUCLEIC ACIDS RESEARCH
- Grad-seq guides the discovery of ProQ as a major small RNA-binding protein
- (2016) Alexandre Smirnov et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Elucidation of pathways of ribosomal RNA degradation: an essential role for RNase E
- (2016) Shaheen Sulthana et al. RNA
- Next generation sequencing analysis reveals that the ribonucleases RNase II, RNase R and PNPase affect bacterial motility and biofilm formation in E. coli
- (2015) Vânia Pobre et al. BMC GENOMICS
- RNA degradosomes in bacteria and chloroplasts: classification, distribution and evolution of RNase E homologs
- (2015) Soraya Aït-Bara et al. MOLECULAR MICROBIOLOGY
- Direct observation of processive exoribonuclease motion using optical tweezers
- (2015) Furqan M. Fazal et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A novel small regulatory RNA enhances cell motility in enterohemorrhagic Escherichia coli
- (2014) Naoki Sudo et al. JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY
- Curli synthesis and biofilm formation in enteric bacteria are controlled by a dynamic small RNA module made up of a pseudoknot assisted by an RNA chaperone
- (2014) Valérie Bordeau et al. NUCLEIC ACIDS RESEARCH
- Molecular recognition of RhlB and RNase D in the Caulobacter crescentus RNA degradosome
- (2014) Jarrod E. Voss et al. NUCLEIC ACIDS RESEARCH
- Vibrio cholerae Utilizes Direct sRNA Regulation in Expression of a Biofilm Matrix Protein
- (2014) Tianyan Song et al. PLoS One
- Bacterial noncoding Y RNAs are widespread and mimic tRNAs
- (2014) Xinguo Chen et al. RNA
- The social fabric of the RNA degradosome
- (2013) Katarzyna J. Bandyra et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- A conserved loop in polynucleotide phosphorylase (PNPase) essential for both RNA and ADP/phosphate binding
- (2013) Thomas Carzaniga et al. BIOCHIMIE
- An RNA Degradation Machine Sculpted by Ro Autoantigen and Noncoding RNA
- (2013) Xinguo Chen et al. CELL
- Dual function of the McaS small RNA in controlling biofilm formation
- (2013) M. G. Jorgensen et al. GENES & DEVELOPMENT
- Multiple Exoribonucleases Catalyze Maturation of the 3′ Terminus of 16S Ribosomal RNA (rRNA)
- (2013) Shaheen Sulthana et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Non-coding Y RNAs as tethers and gates
- (2013) Sandra L Wolin et al. RNA Biology
- Mutation in PNPT1 , which Encodes a Polyribonucleotide Nucleotidyltransferase, Impairs RNA Import into Mitochondria and Causes Respiratory-Chain Deficiency
- (2012) Vanessa Vedrenne et al. AMERICAN JOURNAL OF HUMAN GENETICS
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- (2012) Simon von Ameln et al. AMERICAN JOURNAL OF HUMAN GENETICS
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- (2012) Amanda Henry et al. FEMS MICROBIOLOGY LETTERS
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- (2012) E. Becket et al. JOURNAL OF BACTERIOLOGY
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- (2012) D. Rath et al. MICROBIOLOGY-SGM
- A complex network of small non-coding RNAs regulate motility inEscherichia coli
- (2012) Nicholas De Lay et al. MOLECULAR MICROBIOLOGY
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- (2012) Maureen K. Thomason et al. MOLECULAR MICROBIOLOGY
- RNase E: at the interface of bacterial RNA processing and decay
- (2012) George A. Mackie NATURE REVIEWS MICROBIOLOGY
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- (2012) S. W. Hardwick et al. Open Biology
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- (2011) M. Lehnik-Habrink et al. JOURNAL OF BACTERIOLOGY
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- An RNA degradosome assembly in Caulobacter crescentus
- (2010) S. W. Hardwick et al. NUCLEIC ACIDS RESEARCH
- A role for a bacterial ortholog of the Ro autoantigen in starvation-induced rRNA degradation
- (2010) E. J. Wurtmann et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Human polynucleotide phosphorylase selectively and preferentially degrades microRNA-221 in human melanoma cells
- (2010) S. K. Das et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Degradation of ribosomal RNA during starvation: Comparison to quality control during steady-state growth and a role for RNase PH
- (2010) G. N. Basturea et al. RNA
- Long-Term Survival of Campylobacter jejuni at Low Temperatures Is Dependent on Polynucleotide Phosphorylase Activity
- (2009) N. Haddad et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Polynucleotide Phosphorylase ProtectsEscherichia coliagainst Oxidative Stress†
- (2009) Jinhua Wu et al. BIOCHEMISTRY
- Regulatory RNAs in Bacteria
- (2009) Lauren S. Waters et al. CELL
- Origins and Mechanisms of miRNAs and siRNAs
- (2009) Richard W. Carthew et al. CELL
- RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis
- (2009) Karen Shahbabian et al. EMBO JOURNAL
- Crystal Structure of Escherichia coli Polynucleotide Phosphorylase Core Bound to RNase E, RNA and Manganese: Implications for Catalytic Mechanism and RNA Degradosome Assembly
- (2009) Salima Nurmohamed et al. JOURNAL OF MOLECULAR BIOLOGY
- Novel Activities of Glycolytic Enzymes inBacillus subtilis
- (2009) Fabian M. Commichau et al. MOLECULAR & CELLULAR PROTEOMICS
- Processing of the Escherichia coli leuX tRNA transcript, encoding tRNALeu5, requires either the 3'->5' exoribonuclease polynucleotide phosphorylase or RNase P to remove the Rho-independent transcription terminator
- (2009) B. K. Mohanty et al. NUCLEIC ACIDS RESEARCH
- Human mitochondrial RNA turnover caught in flagranti: involvement of hSuv3p helicase in RNA surveillance
- (2009) Roman J. Szczesny et al. NUCLEIC ACIDS RESEARCH
- RNase P without RNA: Identification and Functional Reconstitution of the Human Mitochondrial tRNA Processing Enzyme
- (2008) Johann Holzmann et al. CELL
- Polynucleotide phosphorylase hinders mRNA degradation upon ribosomal protein S1 overexpression in Escherichia coli
- (2008) F. Briani et al. RNA
- Crystal structure of Escherichia coli PNPase: Central channel residues are involved in processive RNA degradation
- (2008) Z. Shi et al. RNA
- PNPase is a key player in the regulation of small RNAs that control the expression of outer membrane proteins
- (2008) J. M. Andrade et al. RNA
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