Precisely measured protein lifetimes in the mouse brain reveal differences across tissues and subcellular fractions

Newly produced synaptic vesicle proteins are preferentially used in synaptic transmission

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Identification of long-lived synaptic proteins by proteomic analysis of synaptosome protein turnover

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Systematic analysis of protein turnover in primary cells

(2018) Toby Mathieson et al.   Nature Communications

RNA-Dependent Intergenerational Inheritance of Enhanced Synaptic Plasticity after Environmental Enrichment

(2018) Eva Benito et al.   Cell Reports

Local and global influences on protein turnover in neurons and glia

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Kinetic Analysis of Protein Stability Reveals Age-Dependent Degradation

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Codon identity regulates mRNA stability and translation efficiency during the maternal‐to‐zygotic transition

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Hydrogen sulfide is a novel potential virulence factor ofMycoplasma pneumoniae: characterization of the unusual cysteine desulfurase/desulfhydrase HapE

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The road to restoring neural circuits for the treatment of Alzheimer's disease

(2016) Rebecca G. Canter et al.   NATURE

Defects in trafficking bridge Parkinson's disease pathology and genetics

(2016) Asa Abeliovich et al.   NATURE

Division of labor amongMycobacterium smegmatisRNase H enzymes: RNase H1 activity of RnhA or RnhC is essential for growth whereas RnhB and RnhA guard against killing by hydrogen peroxide in stationary phase

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The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible

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Codon Optimality Is a Major Determinant of mRNA Stability

(2015) Vladimir Presnyak et al.   CELL

VPS29-VPS35 intermediate of retromer is stable and may be involved in the retromer complex assembly process

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Codon Bias as a Means to Fine-Tune Gene Expression

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DNA methylation changes in plasticity genes accompany the formation and maintenance of memory

(2015) Rashi Halder et al.   NATURE NEUROSCIENCE

Cell type– and brain region–resolved mouse brain proteome

(2015) Kirti Sharma et al.   NATURE NEUROSCIENCE

MitoCarta2.0: an updated inventory of mammalian mitochondrial proteins

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A “Proteomic Ruler” for Protein Copy Number and Concentration Estimation without Spike-in Standards

(2014) Jacek R. Wiśniewski et al.   MOLECULAR & CELLULAR PROTEOMICS

Composition of isolated synaptic boutons reveals the amounts of vesicle trafficking proteins

(2014) B. G. Wilhelm et al.   SCIENCE

Identification of Long-Lived Proteins Reveals Exceptional Stability of Essential Cellular Structures

(2013) Brandon H. Toyama et al.   CELL

Small-scale isolation of synaptic vesicles from mammalian brain

(2013) Saheeb Ahmed et al.   Nature Protocols

Molecular Profiling of Synaptic Vesicle Docking Sites Reveals Novel Proteins but Few Differences between Glutamatergic and GABAergic Synapses

(2013) Janina Boyken et al.   NEURON

WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013

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Metabolic Turnover of Synaptic Proteins: Kinetics, Interdependencies and Implications for Synaptic Maintenance

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Very long-term memories may be stored in the pattern of holes in the perineuronal net

(2013) R. Y. Tsien   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Compartment Modeling for Mammalian Protein Turnover Studies by Stable Isotope Metabolic Labeling

(2012) Shenheng Guan et al.   ANALYTICAL CHEMISTRY

SynaptomeDB: an ontology-based knowledgebase for synaptic genes

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Estimating the lifetime performance index with Weibull distribution based on progressive first-failure censoring scheme

(2012) Mohammad Vali Ahmadi et al.   JOURNAL OF COMPUTATIONAL AND APPLIED MATHEMATICS

Comparative Study of Human and Mouse Postsynaptic Proteomes Finds High Compositional Conservation and Abundance Differences for Key Synaptic Proteins

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Extremely Long-Lived Nuclear Pore Proteins in the Rat Brain

(2012) J. N. Savas et al.   SCIENCE

Proteome Scale Turnover Analysis in Live Animals Using Stable Isotope Metabolic Labeling

(2011) Yaoyang Zhang et al.   ANALYTICAL CHEMISTRY

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

(2011) Jürgen Cox et al.   JOURNAL OF PROTEOME RESEARCH

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

Analysis of proteome dynamics in the mouse brain

(2010) J. C. Price et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SILAC Mouse for Quantitative Proteomics Uncovers Kindlin-3 as an Essential Factor for Red Blood Cell Function

(2008) Marcus Krüger et al.   CELL

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY