Divergent wiring of repressive and active chromatin interactions between mouse embryonic and trophoblast lineages
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Title
Divergent wiring of repressive and active chromatin interactions between mouse embryonic and trophoblast lineages
Authors
Keywords
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Journal
Nature Communications
Volume 9, Issue 1, Pages -
Publisher
Springer Nature America, Inc
Online
2018-10-04
DOI
10.1038/s41467-018-06666-4
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Note: Only part of the references are listed.- Thrombopoietin signaling to chromatin elicits rapid and pervasive epigenome remodeling within poised chromatin architectures
- (2018) Federico Comoglio et al. GENOME RESEARCH
- A Critical Role of TET1/2 Proteins in Cell-Cycle Progression of Trophoblast Stem Cells
- (2018) Stephanie Chrysanthou et al. Stem Cell Reports
- Allelic reprogramming of 3D chromatin architecture during early mammalian development
- (2017) Zhenhai Du et al. NATURE
- Dynamic epigenomic landscapes during early lineage specification in mouse embryos
- (2017) Yu Zhang et al. NATURE GENETICS
- Global reorganisation of cis-regulatory units upon lineage commitment of human embryonic stem cells
- (2017) Paula Freire-Pritchett et al. eLife
- GOTHiC, a probabilistic model to resolve complex biases and to identify real interactions in Hi-C data
- (2017) Borbala Mifsud et al. PLoS One
- Lineage-Specific Genome Architecture Links Enhancers and Non-coding Disease Variants to Target Gene Promoters
- (2016) Biola M. Javierre et al. CELL
- From the stem of the placental tree: trophoblast stem cells and their progeny
- (2016) Paulina Anna Latos et al. DEVELOPMENT
- Maternal DNA Methylation Regulates Early Trophoblast Development
- (2016) Miguel R. Branco et al. DEVELOPMENTAL CELL
- Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos
- (2016) Xiaoyu Liu et al. NATURE
- Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments
- (2016) Neva C. Durand et al. Cell Systems
- Dynamic Reorganization of Extremely Long-Range Promoter-Promoter Interactions between Two States of Pluripotency
- (2015) Onkar Joshi et al. Cell Stem Cell
- Elf5-centered transcription factor hub controls trophoblast stem cell self-renewal and differentiation through stoichiometry-sensitive shifts in target gene networks
- (2015) Paulina A. Latos et al. GENES & DEVELOPMENT
- The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements
- (2015) Stefan Schoenfelder et al. GENOME RESEARCH
- Insulator dysfunction and oncogene activation in IDH mutant gliomas
- (2015) William A. Flavahan et al. NATURE
- Polycomb repressive complex PRC1 spatially constrains the mouse embryonic stem cell genome
- (2015) Stefan Schoenfelder et al. NATURE GENETICS
- Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C
- (2015) Borbala Mifsud et al. NATURE GENETICS
- Fgf and Esrrb integrate epigenetic and transcriptional networks that regulate self-renewal of trophoblast stem cells
- (2015) Paulina A. Latos et al. Nature Communications
- Variant PRC1 Complex-Dependent H2A Ubiquitylation Drives PRC2 Recruitment and Polycomb Domain Formation
- (2014) Neil P. Blackledge et al. CELL
- 5mC Oxidation by Tet2 Modulates Enhancer Activity and Timing of Transcriptome Reprogramming during Differentiation
- (2014) Gary C. Hon et al. MOLECULAR CELL
- Epigenetic memory of the first cell fate decision prevents complete ES cell reprogramming into trophoblast
- (2014) Francesco Cambuli et al. Nature Communications
- The imprinted polycomb group gene Sfmbt2 is required for trophoblast maintenance and placenta development
- (2013) K. Miri et al. DEVELOPMENT
- Context-Dependent Wiring of Sox2 Regulatory Networks for Self-Renewal of Embryonic and Trophoblast Stem Cells
- (2013) Kenjiro Adachi et al. MOLECULAR CELL
- Single-cell Hi-C reveals cell-to-cell variability in chromosome structure
- (2013) Takashi Nagano et al. NATURE
- Endogenous retroviruses function as species-specific enhancer elements in the placenta
- (2013) Edward B Chuong et al. NATURE GENETICS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- DNA Methylation Profiles Define Stem Cell Identity and Reveal a Tight Embryonic-Extraembryonic Lineage Boundary
- (2012) Claire E. Senner et al. STEM CELLS
- Maternal diet and aging alter the epigenetic control of a promoter-enhancer interaction at the Hnf4a gene in rat pancreatic islets
- (2011) I. Sandovici et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Gata3 regulates trophoblast development downstream of Tead4 and in parallel to Cdx2
- (2010) A. Ralston et al. DEVELOPMENT
- Ring1B and Suv39h1 delineate distinct chromatin states at bivalent genes during early mouse lineage commitment
- (2010) O. Alder et al. DEVELOPMENT
- Distinct histone modifications in stem cell lines and tissue lineages from the early mouse embryo
- (2010) P. J. Rugg-Gunn et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- Eset partners with Oct4 to restrict extraembryonic trophoblast lineage potential in embryonic stem cells
- (2009) P. Yuan et al. GENES & DEVELOPMENT
- Epigenetic dynamics of stem cells and cell lineage commitment: digging Waddington's canal
- (2009) Myriam Hemberger et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- ERG-associated protein with SET domain (ESET)-Oct4 interaction regulates pluripotency and represses the trophectoderm lineage
- (2009) Leng-Siew Yeap et al. Epigenetics & Chromatin
- F-Seq: a feature density estimator for high-throughput sequence tags
- (2008) A. P. Boyle et al. BIOINFORMATICS
- Epigenetic restriction of embryonic cell lineage fate by methylation of Elf5
- (2008) Ray Kit Ng et al. NATURE CELL BIOLOGY
- Tead4 is required for specification of trophectoderm in pre-implantation mouse embryos
- (2007) Noriyuki Nishioka et al. MECHANISMS OF DEVELOPMENT
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