Single-cell microRNA-mRNA co-sequencing reveals non-genetic heterogeneity and mechanisms of microRNA regulation
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Title
Single-cell microRNA-mRNA co-sequencing reveals non-genetic heterogeneity and mechanisms of microRNA regulation
Authors
Keywords
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Journal
Nature Communications
Volume 10, Issue 1, Pages -
Publisher
Springer Nature
Online
2019-01-03
DOI
10.1038/s41467-018-07981-6
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Note: Only part of the references are listed.- scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells
- (2018) Stephen J. Clark et al. Nature Communications
- Seq-Well: portable, low-cost RNA sequencing of single cells at high throughput
- (2017) Todd M Gierahn et al. NATURE METHODS
- Single-Cell Multiomics: Multiple Measurements from Single Cells
- (2017) Iain C. Macaulay et al. TRENDS IN GENETICS
- Single-cell triple omics sequencing reveals genetic, epigenetic and transcriptomic heterogeneity in hepatocellular carcinomas
- (2016) Yu Hou et al. CELL RESEARCH
- Impact of MicroRNA Levels, Target-Site Complementarity, and Cooperativity on Competing Endogenous RNA-Regulated Gene Expression
- (2016) Rémy Denzler et al. MOLECULAR CELL
- Single-cell sequencing of the small-RNA transcriptome
- (2016) Omid R Faridani et al. NATURE BIOTECHNOLOGY
- Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity
- (2016) Christof Angermueller et al. NATURE METHODS
- Single-cell RNA-sequencing: The future of genome biology is now
- (2016) Simone Picelli RNA Biology
- An Automated Microwell Platform for Large-Scale Single Cell RNA-Seq
- (2016) Jinzhou Yuan et al. Scientific Reports
- Endogenous tRNA-Derived Fragments Suppress Breast Cancer Progression via YBX1 Displacement
- (2015) Hani Goodarzi et al. CELL
- Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
- (2015) Evan Z. Macosko et al. CELL
- G&T-seq: parallel sequencing of single-cell genomes and transcriptomes
- (2015) Iain C Macaulay et al. NATURE METHODS
- Characterization of the mammalian miRNA turnover landscape
- (2015) Yanwen Guo et al. NUCLEIC ACIDS RESEARCH
- MicroRNA control of protein expression noise
- (2015) J. M. Schmiedel et al. SCIENCE
- The Molecular Signatures Database Hallmark Gene Set Collection
- (2015) Arthur Liberzon et al. Cell Systems
- Endogenous miRNA and Target Concentrations Determine Susceptibility to Potential ceRNA Competition
- (2014) Andrew D. Bosson et al. MOLECULAR CELL
- Full-length RNA-seq from single cells using Smart-seq2
- (2014) Simone Picelli et al. Nature Protocols
- Emerging roles of tRNA in adaptive translation, signalling dynamics and disease
- (2014) Sebastian Kirchner et al. NATURE REVIEWS GENETICS
- mirCoX: a database of miRNA-mRNA expression correlations derived from RNA-seq meta-analysis
- (2013) Cory B Giles et al. BMC BIOINFORMATICS
- Beyond microRNA – Novel RNAs derived from small non-coding RNA and their implication in cancer
- (2013) Elena S. Martens-Uzunova et al. CANCER LETTERS
- Akt-Mediated Phosphorylation of Argonaute 2 Downregulates Cleavage and Upregulates Translational Repression of MicroRNA Targets
- (2013) Shane R. Horman et al. MOLECULAR CELL
- Quantitative single-cell RNA-seq with unique molecular identifiers
- (2013) Saiful Islam et al. NATURE METHODS
- Smart-seq2 for sensitive full-length transcriptome profiling in single cells
- (2013) Simone Picelli et al. NATURE METHODS
- Single-cell sequencing-based technologies will revolutionize whole-organism science
- (2013) Ehud Shapiro et al. NATURE REVIEWS GENETICS
- Single-Cell DNA-Methylation Analysis Reveals Epigenetic Chimerism in Preimplantation Embryos
- (2013) C. Lorthongpanich et al. SCIENCE
- Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
- (2012) Daniel Ramsköld et al. NATURE BIOTECHNOLOGY
- Genome-wide copy number analysis of single cells
- (2012) Timour Baslan et al. Nature Protocols
- MicroRNA profiling: approaches and considerations
- (2012) Colin C. Pritchard et al. NATURE REVIEWS GENETICS
- miRGator v3.0: a microRNA portal for deep sequencing, expression profiling and mRNA targeting
- (2012) Sooyoung Cho et al. NUCLEIC ACIDS RESEARCH
- Genome-Wide Detection of Single-Nucleotide and Copy-Number Variations of a Single Human Cell
- (2012) C. Zong et al. SCIENCE
- CEL-Seq: Single-Cell RNA-Seq by Multiplexed Linear Amplification
- (2012) Tamar Hashimshony et al. Cell Reports
- Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq
- (2011) S. Islam et al. GENOME RESEARCH
- Tumour evolution inferred by single-cell sequencing
- (2011) Nicholas Navin et al. NATURE
- MicroRNAs can generate thresholds in target gene expression
- (2011) Shankar Mukherji et al. NATURE GENETICS
- Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood
- (2010) Candida Vaz et al. BMC GENOMICS
- Target mRNA abundance dilutes microRNA and siRNA activity
- (2010) Aaron Arvey et al. Molecular Systems Biology
- RNA-Seq analysis to capture the transcriptome landscape of a single cell
- (2010) Fuchou Tang et al. Nature Protocols
- Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells
- (2010) Y. Taniguchi et al. SCIENCE
- mRNA-Seq whole-transcriptome analysis of a single cell
- (2009) Fuchou Tang et al. NATURE METHODS
- Causes and consequences of microRNA dysregulation in cancer
- (2009) Carlo M. Croce NATURE REVIEWS GENETICS
- Imaging individual microRNAs in single mammalian cells in situ
- (2009) J. Lu et al. NUCLEIC ACIDS RESEARCH
- MicroRNA-Mediated Control of Cell Fate in Megakaryocyte-Erythrocyte Progenitors
- (2008) Jun Lu et al. DEVELOPMENTAL CELL
- MicroRNA target prediction by expression analysis of host genes
- (2008) V. A. Gennarino et al. GENOME RESEARCH
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