Identification and characterization of drought responsive microRNAs and their target genes in cardamom (Elettaria cardamomum Maton)
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Title
Identification and characterization of drought responsive microRNAs and their target genes in cardamom (Elettaria cardamomum Maton)
Authors
Keywords
Cardamom, MicroRNA, Drought, Next generation sequencing, Bioinformatics, qRT PCR
Journal
PLANT GROWTH REGULATION
Volume -, Issue -, Pages -
Publisher
Springer Nature
Online
2018-12-03
DOI
10.1007/s10725-018-0462-9
References
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Note: Only part of the references are listed.- Identification of miRNAs and their targets by high-throughput sequencing and degradome analysis in cytoplasmic male-sterile line NJCMS1A and its maintainer NJCMS1B of soybean
- (2016) Xianlong Ding et al. BMC GENOMICS
- Characterization of drought- and heat-responsive microRNAs in switchgrass
- (2016) Vandana Hivrale et al. PLANT SCIENCE
- Computational prediction, identification, and expression profiling of microRNAs in banana (Musaspp.) during soil moisture deficit stress
- (2016) M. Muthusamy et al. JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY
- MicroRNA Signatures of Drought Signaling in Rice Root
- (2016) Behnam Bakhshi et al. PLoS One
- High-quality RNA extraction from small cardamom tissues rich in polysaccharides and polyphenols
- (2015) Fasiludeen Nadiya et al. ANALYTICAL BIOCHEMISTRY
- An integrative approach to identify hexaploid wheat miRNAome associated with development and tolerance to abiotic stress
- (2015) Zahra Agharbaoui et al. BMC GENOMICS
- Global analysis of uncapped mRNA changes under drought stress and microRNA-dependent endonucleolytic cleavages in foxtail millet
- (2015) Fei Yi et al. BMC PLANT BIOLOGY
- miRNA-based drought regulation in wheat
- (2015) Guray Akdogan et al. FUNCTIONAL & INTEGRATIVE GENOMICS
- miR408 overexpression causes increased drought tolerance in chickpea
- (2015) Mortaza Hajyzadeh et al. GENE
- Genome-wide identification of turnip mosaic virus-responsive microRNAs in non-heading Chinese cabbage by high-throughput sequencing
- (2015) Zhen Wang et al. GENE
- Genome-Wide Identification and Analysis of Drought-Responsive Genes and MicroRNAs in Tobacco
- (2015) Fuqiang Yin et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Altered microRNA Expression Profiles and Regulation of INK4A/CDKN2A Tumor Suppressor Genes in Canine Breast Cancer Models
- (2015) Farruk Mohammad Lutful Kabir et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- Chemopreventive Effect of Cardamom (Elettaria cardamomum L.) Against Benzo(α)Pyrene-Induced Forestomach Papillomagenesis in Swiss Albino Mice
- (2015) Samir Qiblawi et al. JOURNAL OF ENVIRONMENTAL PATHOLOGY TOXICOLOGY AND ONCOLOGY
- MicroRNA: a new target for improving plant tolerance to abiotic stress
- (2015) Baohong Zhang JOURNAL OF EXPERIMENTAL BOTANY
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- (2015) Jannatul Ferdous et al. PLANT BIOTECHNOLOGY JOURNAL
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- Identification of four novel stu-miR169s and their target genes in Solanum tuberosum and expression profiles response to drought stress
- (2015) Jiangwei Yang et al. PLANT SYSTEMATICS AND EVOLUTION
- Cross Platform Standardisation of an Experimental Pipeline for Use in the Identification of Dysregulated Human Circulating MiRNAs
- (2015) Helena Kelly et al. PLoS One
- Identification of miRNAs and their targets in transgenic Brassica napus and its acceptor (Westar) by high-throughput sequencing and degradome analysis
- (2015) Cheng-Yi Tang et al. RSC Advances
- Transcriptome-wide analysis of chromium-stress responsive microRNAs to explore miRNA-mediated regulatory networks in radish (Raphanus sativus L.)
- (2015) Wei Liu et al. Scientific Reports
- Differential expression of seven conserved microRNAs in response to abiotic stress and their regulatory network in Helianthus annuus
- (2015) Reyhaneh Ebrahimi Khaksefidi et al. Frontiers in Plant Science
- Identification of novel drought-responsive microRNAs and trans-acting siRNAs from Sorghum bicolor (L.) Moench by high-throughput sequencing analysis
- (2015) Amit Katiyar et al. Frontiers in Plant Science
- Identification of MicroRNAs in Response to Different Day Lengths in Soybean Using High-Throughput Sequencing and qRT-PCR
- (2015) Wenbin Li et al. PLoS One
- High-Throughput Development of SSR Markers from Pea (Pisum sativum L.) Based on Next Generation Sequencing of a Purified Chinese Commercial Variety
- (2015) Tao Yang et al. PLoS One
- Whole-genome discovery of miRNAs and their targets in wheat (Triticum aestivum L.)
- (2014) Fenglong Sun et al. BMC PLANT BIOLOGY
- Identification and characterization of cold-responsive microRNAs in tea plant (Camellia sinensis) and their targets using high-throughput sequencing and degradome analysis
- (2014) Yue Zhang et al. BMC PLANT BIOLOGY
- Genome-wide discovery and differential regulation of conserved and novel microRNAs in chickpea via deep sequencing
- (2014) Mukesh Jain et al. JOURNAL OF EXPERIMENTAL BOTANY
- Quality control of next-generation sequencing data without a reference
- (2014) Urmi H. Trivedi et al. Frontiers in Genetics
- Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
- (2013) Peng Shuai et al. BMC GENOMICS
- miR394 and LCR are involved in Arabidopsis salt and drought stress responses in an abscisic acid-dependent manner
- (2013) Jian Song et al. BMC PLANT BIOLOGY
- Emerging roles of microRNAs in the mediation of drought stress response in plants
- (2013) Yanfei Ding et al. JOURNAL OF EXPERIMENTAL BOTANY
- The role of rice microRNAs in abiotic stress responses
- (2013) Dong-Hoon Jeong et al. JOURNAL OF PLANT BIOLOGY
- Drought Tolerance in Wheat
- (2013) Arash Nezhadahmadi et al. TheScientificWorldJOURNAL
- Differential Expression of MicroRNAs in Response to Drought Stress in Maize
- (2013) Jing-sheng LI et al. Journal of Integrative Agriculture
- MicroRNAs play critical roles during plant development and in response to abiotic stresses
- (2012) Júlio César de Lima et al. GENETICS AND MOLECULAR BIOLOGY
- OsTIR1 and OsAFB2 Downregulation via OsmiR393 Overexpression Leads to More Tillers, Early Flowering and Less Tolerance to Salt and Drought in Rice
- (2012) Kuaifei Xia et al. PLoS One
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- (2011) Blanca E Barrera-Figueroa et al. BMC PLANT BIOLOGY
- Genome-wide characterization of new and drought stress responsive microRNAs in Populus euphratica
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- (2011) Eul-Won Hwang Journal of the Korean Society for Applied Biological Chemistry
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- agriGO: a GO analysis toolkit for the agricultural community
- (2010) Zhou Du et al. NUCLEIC ACIDS RESEARCH
- miRNA expression patterns of Triticum dicoccoides in response to shock drought stress
- (2010) Melda Kantar et al. PLANTA
- Domestication of cardamom (Elettaria cardamomum) in Western Ghats, India: divergence in productive traits and a shift in major pollinators
- (2009) Giby Kuriakose et al. ANNALS OF BOTANY
- Identification of microRNAs and their targets from Populus euphratica
- (2009) Bosheng Li et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Next-Generation Sequencing: From Basic Research to Diagnostics
- (2009) K. V. Voelkerding et al. CLINICAL CHEMISTRY
- Ectopic expression of miR396 suppressesGRFtarget gene expression and alters leaf growth inArabidopsis
- (2009) Dongmei Liu et al. PHYSIOLOGIA PLANTARUM
- miR398 and miR408 are up-regulated in response to water deficit in Medicago truncatula
- (2009) Inês Trindade et al. PLANTA
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- In silico identification of conserved microRNAs in large number of diverse plant species
- (2008) Ramanjulu Sunkar et al. BMC PLANT BIOLOGY
- Applications of next-generation sequencing technologies in functional genomics
- (2008) Olena Morozova et al. GENOMICS
- The Arabidopsis NFYA5 Transcription Factor Is Regulated Transcriptionally and Posttranscriptionally to Promote Drought Resistance
- (2008) W.-X. Li et al. PLANT CELL
- MicroRNA166 controls root and nodule development in Medicago truncatula
- (2008) Adnane Boualem et al. PLANT JOURNAL
- Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana
- (2008) H.-H. Liu et al. RNA
- Widespread Translational Inhibition by Plant miRNAs and siRNAs
- (2008) P. Brodersen et al. SCIENCE
- Real-time PCR quantification of precursor and mature microRNA
- (2007) Thomas D. Schmittgen et al. METHODS
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