Genome-Wide Identification of miRNAs Responsive to Drought in Peach (Prunus persica) by High-Throughput Deep Sequencing

The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis

(2012) Domenico De Paola et al.   BMC GENOMICS

Identification of microRNAs from Amur grape (vitis amurensis Rupr.) by deep sequencing and analysis of microRNA variations with bioinformatics

(2012) Chen Wang et al.   BMC GENOMICS

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

Analysis of the melon (Cucumis melo) small RNAome by high-throughput pyrosequencing

(2011) Daniel Gonzalez-Ibeas et al.   BMC GENOMICS

Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing

(2011) Tianzuo Wang et al.   BMC GENOMICS

Characterization of the stress associated microRNAs in Glycine max by deep sequencing

(2011) Haiyan Li et al.   BMC PLANT BIOLOGY

Identification and comparative analysis of drought-associated microRNAs in two cowpea genotypes

(2011) Blanca E Barrera-Figueroa et al.   BMC PLANT BIOLOGY

Genome-wide characterization of new and drought stress responsive microRNAs in Populus euphratica

(2011) Bosheng Li et al.   JOURNAL OF EXPERIMENTAL BOTANY

Microarray-based analysis of cadmium-responsive microRNAs in rice (Oryza sativa)

(2011) Yanfei Ding et al.   JOURNAL OF EXPERIMENTAL BOTANY

The study of a SPATULA-like bHLH transcription factor expressed during peach (Prunus persica) fruit development

(2011) Eleni Tani et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Sequencing-Based Approaches Reveal Low Ambient Temperature-Responsive and Tissue-Specific MicroRNAs in Phalaenopsis Orchid

(2011) Feng-Ming An et al.   PLoS One

Identification and Characterization of microRNAs from Peanut (Arachis hypogaea L.) by High-Throughput Sequencing

(2011) Xiaoyuan Chi et al.   PLoS One

Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)

(2010) Chuan-Zhi Zhao et al.   BMC PLANT BIOLOGY

Regulation of barley miRNAs upon dehydration stress correlated with target gene expression

(2010) Melda Kantar et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Genome-wide identification and analysis of drought-responsive microRNAs in Oryza sativa

(2010) Liguo Zhou et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application

(2010) Turgay Unver et al.   MOLECULAR GENETICS AND GENOMICS

Identification and analysis of seven H2O2-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)

(2010) Tian Li et al.   NUCLEIC ACIDS RESEARCH

miRBase: integrating microRNA annotation and deep-sequencing data

(2010) A. Kozomara et al.   NUCLEIC ACIDS RESEARCH

Identification of conserved micro-RNAs and their target transcripts in opium poppy (Papaver somniferum L.)

(2010) Turgay Unver et al.   PLANT CELL REPORTS

Investigation of the microRNAs in safflower seed, leaf, and petal by high-throughput sequencing

(2010) Haiyan Li et al.   PLANTA

Identification and characterization of a novel miR159 target not related to MYB in tomato

(2010) Kobi Buxdorf et al.   PLANTA

miRNA expression patterns of Triticum dicoccoides in response to shock drought stress

(2010) Melda Kantar et al.   PLANTA

Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression

(2010) A. Git et al.   RNA

MicroRNAs with macro-effects on plant stress responses

(2010) Ramanjulu Sunkar   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response

(2009) Jingyu Zhang et al.   BMC GENOMICS

Members of miR-169 family are induced by high salinity and transiently inhibit the NF-YA transcription factor

(2009) Botao Zhao et al.   BMC MOLECULAR BIOLOGY

Expression profiling of microRNAs by deep sequencing

(2009) C. J. Creighton et al.   BRIEFINGS IN BIOINFORMATICS

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv

(2009) Bo Wei et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

UV-B-responsive microRNAs in Populus tremula

(2009) Xiaoyun Jia et al.   JOURNAL OF PLANT PHYSIOLOGY

Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families

(2009) Guru Jagadeeswaran et al.   NEW PHYTOLOGIST

PMRD: plant microRNA database

(2009) Zhenhai Zhang et al.   NUCLEIC ACIDS RESEARCH

Reactive oxygen species homeostasis and signalling during drought and salinity stresses

(2009) GAD MILLER et al.   PLANT CELL AND ENVIRONMENT

Conserved and novel miRNAs in the legume Phaseolus vulgaris in response to stress

(2009) Catalina Arenas-Huertero et al.   PLANT MOLECULAR BIOLOGY

miR398 and miR408 are up-regulated in response to water deficit in Medicago truncatula

(2009) Inês Trindade et al.   PLANTA

Biotic and abiotic stress down-regulate miR398 expression in Arabidopsis

(2009) Guru Jagadeeswaran et al.   PLANTA

Conserved microRNAs and their targets in model grass species Brachypodium distachyon

(2009) Turgay Unver et al.   PLANTA

Quantitative miRNA expression analysis: Comparing microarrays with next-generation sequencing

(2009) H. Willenbrock et al.   RNA

A Genome-Wide Characterization of MicroRNA Genes in Maize

(2009) Lifang Zhang et al.   PLoS Genetics

Differential expression of miRNAs in response to salt stress in maize roots

(2008) Dong Ding et al.   ANNALS OF BOTANY

Identification of cold-inducible microRNAs in plants by transcriptome analysis

(2008) X ZHOU et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

In silico identification of conserved microRNAs in large number of diverse plant species

(2008) Ramanjulu Sunkar et al.   BMC PLANT BIOLOGY

MicroRNA detection by northern blotting using locked nucleic acid probes

(2008) Éva Várallyay et al.   Nature Protocols

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

The Arabidopsis NFYA5 Transcription Factor Is Regulated Transcriptionally and Posttranscriptionally to Promote Drought Resistance

(2008) W.-X. Li et al.   PLANT CELL

Stress-responsive microRNAs inPopulus

(2008) Shanfa Lu et al.   PLANT JOURNAL

Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana

(2008) H.-H. Liu et al.   RNA

The Blue Revolution, Drop by Drop, Gene by Gene

(2008) E. Pennisi   SCIENCE

A framework physical map for peach, a model Rosaceae species

(2008) T. N. Zhebentyayeva et al.   Tree Genetics & Genomes