- Home
- Publications
- Publication Search
- Publication Details
Title
Fast and accurate genomic analyses using genome graphs
Authors
Keywords
-
Journal
NATURE GENETICS
Volume -, Issue -, Pages -
Publisher
Springer Nature
Online
2019-01-09
DOI
10.1038/s41588-018-0316-4
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Variation graph toolkit improves read mapping by representing genetic variation in the reference
- (2018) Erik Garrison et al. NATURE BIOTECHNOLOGY
- Genome graphs and the evolution of genome inference
- (2017) Benedict Paten et al. GENOME RESEARCH
- Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
- (2017) Valerie A. Schneider et al. GENOME RESEARCH
- Sequencing and de novo assembly of 150 genomes from Denmark as a population reference
- (2017) Lasse Maretty et al. NATURE
- Graphtyper enables population-scale genotyping using pangenome graphs
- (2017) Hannes P Eggertsson et al. NATURE GENETICS
- The Simons Genome Diversity Project: 300 genomes from 142 diverse populations
- (2016) Swapan Mallick et al. NATURE
- Analysis of protein-coding genetic variation in 60,706 humans
- (2016) Monkol Lek et al. NATURE
- Extensive sequencing of seven human genomes to characterize benchmark reference materials
- (2016) Justin M. Zook et al. Scientific Data
- An integrated map of structural variation in 2,504 human genomes
- (2015) Peter H. Sudmant et al. NATURE
- A global reference for human genetic variation
- (2015) Richard A. Gibbs et al. NATURE
- Improved genome inference in the MHC using a population reference graph
- (2015) Alexander Dilthey et al. NATURE GENETICS
- HISAT: a fast spliced aligner with low memory requirements
- (2015) Daehwan Kim et al. NATURE METHODS
- Genome of the Netherlands population-specific imputations identify an ABCA6 variant associated with cholesterol levels
- (2015) Elisabeth M. van Leeuwen et al. Nature Communications
- Improved imputation of low-frequency and rare variants using the UK10K haplotype reference panel
- (2015) Jie Huang et al. Nature Communications
- Rare variant discovery by deep whole-genome sequencing of 1,070 Japanese individuals
- (2015) Masao Nagasaki et al. Nature Communications
- Mapping Bias Overestimates Reference Allele Frequencies at the HLA Genes in the 1000 Genomes Project Phase I Data
- (2015) Débora Y. C. Brandt et al. G3-Genes Genomes Genetics
- Genome measures used for quality control are dependent on gene function and ancestry
- (2014) Jing Wang et al. BIOINFORMATICS
- Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls
- (2014) Justin M Zook et al. NATURE BIOTECHNOLOGY
- Short read alignment with populations of genomes
- (2013) L. Huang et al. BIOINFORMATICS
- Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture
- (2013) Sonja I Berndt et al. NATURE GENETICS
- Large-scale genotyping identifies 41 new loci associated with breast cancer risk
- (2013) Kyriaki Michailidou et al. NATURE GENETICS
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- (2011) Mark A DePristo et al. NATURE GENETICS
- Genome structural variation discovery and genotyping
- (2011) Can Alkan et al. NATURE REVIEWS GENETICS
- Modernizing Reference Genome Assemblies
- (2011) Deanna M. Church et al. PLOS BIOLOGY
- Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data
- (2009) Jacob F. Degner et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Simultaneous alignment of short reads against multiple genomes
- (2009) Korbinian Schneeberger et al. GENOME BIOLOGY
- MMEJ repair of double-strand breaks (director’s cut): deleted sequences and alternative endings
- (2008) Mitch McVey et al. TRENDS IN GENETICS
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started