Divergence in Diversity and Composition of Root-Associated Fungi Between Greenhouse and Field Studies in a Semiarid Grassland

Assembly and ecological function of the root microbiome across angiosperm plant species

(2018) Connor R. Fitzpatrick et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant-soil feedbacks: a comparative study on the relative importance of soil feedbacks in the greenhouse versus the field

(2016) Johannes Heinze et al.   OECOLOGIA

Plant–soil feedbacks promote negative frequency dependence in the coexistence of two aridland grasses

(2016) Y. Anny Chung et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Host genotype and age shape the leaf and root microbiomes of a wild perennial plant

(2016) Maggie R. Wagner et al.   Nature Communications

Long-Term Dynamics and Hotspots of Change in a Desert Grassland Plant Community

(2015) Scott L. Collins et al.   AMERICAN NATURALIST

Ectomycorrhizal fungal spore bank recovery after a severe forest fire: some like it hot

(2015) Sydney I Glassman et al.   ISME Journal

Endophytic fungal symbionts associated with gypsophilous plants

(2014) Andrea Porras-Alfaro et al.   Botany

Plant species capacity to drive soil fungal communities contributes to differential impacts of plant–soil legacies

(2014) Emily W. Lankau et al.   ECOLOGY

Plant diversity predicts beta but not alpha diversity of soil microbes across grasslands worldwide

(2014) Suzanne M. Prober et al.   ECOLOGY LETTERS

Heterogeneity in plant-soil feedbacks and resident population dynamics affect mutual invasibility

(2014) Jean H. Burns et al.   JOURNAL OF ECOLOGY

Coexistence and relative abundance in plant communities are determined by feedbacks when the scale of feedback and dispersal is local

(2014) Keenan M. L. Mack et al.   JOURNAL OF ECOLOGY

Parsing ecological signal from noise in next generation amplicon sequencing

(2014) Nhu H. Nguyen et al.   NEW PHYTOLOGIST

Habitat-specific positive and negative effects of soil biota on seedling growth in a fragmented tropical montane landscape

(2014) Camila Pizano et al.   OIKOS

Macrodiplodiopsis in Lophiostomataceae, Pleosporales

(2014) NALIN N. WIJAYAWARDENE et al.   Phytotaxa

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

Biotic plant-soil feedbacks across temporal scales

(2013) Paul Kardol et al.   JOURNAL OF ECOLOGY

Plant-soil feedbacks: the past, the present and future challenges

(2013) Wim H. van der Putten et al.   JOURNAL OF ECOLOGY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

(2013) Björn D. Lindahl et al.   NEW PHYTOLOGIST

A Common Garden Test of Host-Symbiont Specificity Supports a Dominant Role for Soil Type in Determining AMF Assemblage Structure in Collinsia sparsiflora

(2013) Shannon P. Schechter et al.   PLoS One

New primers to amplify the fungal ITS2 region - evaluation by 454-sequencing of artificial and natural communities

(2012) Katarina Ihrmark et al.   FEMS MICROBIOLOGY ECOLOGY

Host plant and environment influence community assembly of High Arctic root-associated fungal communities

(2012) Kei E. Fujimura et al.   Fungal Ecology

Long-term experimental loss of foundation species: consequences for dynamics at ecotones across heterogeneous landscapes

(2012) Debra P. C. Peters et al.   Ecosphere

Hidden Fungi, Emergent Properties: Endophytes and Microbiomes

(2011) Andrea Porras-Alfaro et al.   Annual Review of Phytopathology

Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification

(2011) David Berry et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Soil microbes drive the classic plant diversity–productivity pattern

(2010) Stefan A. Schnitzer et al.   ECOLOGY

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

Fungal community responses to precipitation

(2010) CHRISTINE V. HAWKES et al.   GLOBAL CHANGE BIOLOGY

Plant-soil feedback: experimental approaches, statistical analyses and ecological interpretations

(2010) E. Pernilla Brinkman et al.   JOURNAL OF ECOLOGY

Negative plant–soil feedback predicts tree-species relative abundance in a tropical forest

(2010) Scott A. Mangan et al.   NATURE

Rooting theories of plant community ecology in microbial interactions

(2010) James D. Bever et al.   TRENDS IN ECOLOGY & EVOLUTION

Pathogenesis, parasitism and mutualism in the trophic space of microbe–plant interactions

(2010) Adrian C. Newton et al.   TRENDS IN MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Influence of plant species and soil conditions on plant-soil feedback in mixed grassland communities

(2009) Kathryn A. Harrison et al.   JOURNAL OF ECOLOGY

Evidence for alteration of fungal endophyte community assembly by host defense compounds

(2009) Megan Saunders et al.   NEW PHYTOLOGIST

Within-Year Soil Legacies Contribute to Strong Priority Effects of Exotics on Native California Grassland Communities

(2009) Emily Grman et al.   RESTORATION ECOLOGY

Novel Root Fungal Consortium Associated with a Dominant Desert Grass

(2008) A. Porras-Alfaro et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PLANT–SOIL FEEDBACK: TESTING THE GENERALITY WITH THE SAME GRASSES IN SERPENTINE AND PRAIRIE SOILS

(2008) Brenda B. Casper et al.   ECOLOGY

PLANT–SOIL–MICROORGANISM INTERACTIONS: HERITABLE RELATIONSHIP BETWEEN PLANT GENOTYPE AND ASSOCIATED SOIL MICROORGANISMS

(2008) Jennifer A. Schweitzer et al.   ECOLOGY

Plant-soil feedbacks: a meta-analytical review

(2008) Andrew Kulmatiski et al.   ECOLOGY LETTERS

Fungal root endophytes from natural vegetation in Mediterranean environments with special reference to Fusarium spp

(2008) Jose G. Maciá-Vicente et al.   FEMS MICROBIOLOGY ECOLOGY

Form and function of grass ring patterns in arid grasslands: the role of abiotic controls

(2008) Sujith Ravi et al.   OECOLOGIA