Application of the isotope pairing technique in sediments: Use, challenges, and new directions

Declining oxygen in the global ocean and coastal waters

(2018) Denise Breitburg et al.   SCIENCE

Filamentous Giant Beggiatoaceae from the Guaymas Basin Are Capable of both Denitrification and Dissimilatory Nitrate Reduction to Ammonium

(2018) Charles A. Schutte et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Growth and Population Dynamics of the Anaerobic Fe(II)-Oxidizing and Nitrate-Reducing Enrichment Culture KS

(2018) Claudia Tominski et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metabolic specialization of denitrifiers in permeable sediments controls N2 O emissions

(2018) Hannah K. Marchant et al.   ENVIRONMENTAL MICROBIOLOGY

Turbulence simultaneously stimulates small- and large-scale CO2 sequestration by chain-forming diatoms in the sea

(2018) Johanna Bergkvist et al.   Nature Communications

Cable bacteria promote DNRA through iron sulfide dissolution

(2018) Adam J. Kessler et al.   LIMNOLOGY AND OCEANOGRAPHY

Microphytobenthos and chironomid larvae attenuate nutrient recycling in shallow-water sediments

(2017) Sara Benelli et al.   FRESHWATER BIOLOGY

Unexpectedly high degree of anammox and DNRA in seagrass sediments: Description and application of a revised isotope pairing technique

(2017) Kateri R. Salk et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

The fate of nitrogen is linked to iron(II) availability in a freshwater lake sediment

(2017) Elizabeth K. Robertson et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Denitrifying community in coastal sediments performs aerobic and anaerobic respiration simultaneously

(2017) Hannah K Marchant et al.   ISME Journal

Nitrate consumption in sediments of the German Bight (North Sea)

(2017) Andreas Neumann et al.   JOURNAL OF SEA RESEARCH

N2 production through denitrification and anammox across the continental margin (shelf-slope-rise) of the Ulleung Basin, East Sea

(2017) Taehee Na et al.   LIMNOLOGY AND OCEANOGRAPHY

Benthic N pathways in illuminated and bioturbated sediments studied with network analysis

(2017) M. Magri et al.   LIMNOLOGY AND OCEANOGRAPHY

Push-pull incubation method reveals the importance of denitrification and dissimilatory nitrate reduction to ammonium in seagrass root zone

(2017) Lillian R. Aoki et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

The influence of coring method on the preservation of sedimentary and biogeochemical features when sampling soft-bottom, shallow coastal environments

(2017) Andrew O. M. Mogg et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Denitrification in an oligotrophic estuary: a delayed sink for riverine nitrate

(2017) D Hellemann et al.   MARINE ECOLOGY PROGRESS SERIES

Live benthic foraminifera in the Yellow Sea and the East China Sea: vertical distribution, nitrate storage, and potential denitrification

(2017) Z Xu et al.   MARINE ECOLOGY PROGRESS SERIES

Denitrification in an oligotrophic estuary: a delayed sink for riverine nitrate

(2017) D Hellemann et al.   MARINE ECOLOGY PROGRESS SERIES

Live benthic foraminifera in the Yellow Sea and the East China Sea: vertical distribution, nitrate storage, and potential denitrification

(2017) Z Xu et al.   MARINE ECOLOGY PROGRESS SERIES

Novel anammox bacteria and nitrogen loss from Lake Superior

(2017) Sean A. Crowe et al.   Scientific Reports

Evidence for the Existence of Autotrophic Nitrate-Reducing Fe(II)-Oxidizing Bacteria in Marine Coastal Sediment

(2016) Katja Laufer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Nitrogen uptake and coupled nitrification–denitrification in riverine sediments with benthic microalgae and rooted macrophytes

(2016) Erica Racchetti et al.   AQUATIC SCIENCES

Biological nitrate transport in sediments on the Peruvian margin mitigates benthic sulfide emissions and drives pelagic N loss during stagnation events

(2016) A.W. Dale et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Cell-specific nitrogen- and carbon-fixation of cyanobacteria in a temperate marine system (Baltic Sea)

(2016) I. Klawonn et al.   ENVIRONMENTAL MICROBIOLOGY

Cable Bacteria Control Iron–Phosphorus Dynamics in Sediments of a Coastal Hypoxic Basin

(2016) Fatimah Sulu-Gambari et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Sediment Nitrogen Fixation: a Call for Re-evaluating Coastal N Budgets

(2016) Silvia E. Newell et al.   Estuaries and Coasts

Benthic nutrient fluxes in the Eastern Gotland Basin (Baltic Sea) with particular focus on microbial mat ecosystems

(2016) A. Noffke et al.   JOURNAL OF MARINE SYSTEMS

Coupled nitrification-denitrification leads to extensive N loss in subtidal permeable sediments

(2016) Hannah K. Marchant et al.   LIMNOLOGY AND OCEANOGRAPHY

Microbial nitrogen processing in hard clam (Mercenaria mercenaria) aquaculture sediments: the relative importance of denitrification and dissimilatory nitrate reduction to ammonium (DNRA)

(2016) Anna E. Murphy et al.   LIMNOLOGY AND OCEANOGRAPHY

Application of the isotope pairing technique in sediments where anammox, denitrification, and dissimilatory nitrate reduction to ammonium coexist

(2016) G. D. Song et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Biotic and abiotic controls on co-occurring nitrogen cycling processes in shallow Arctic shelf sediments

(2016) N. D. McTigue et al.   Nature Communications

Coexistence of Microaerophilic, Nitrate-Reducing, and Phototrophic Fe(II) Oxidizers and Fe(III) Reducers in Coastal Marine Sediment

(2015) Katja Laufer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Oxygenation of an anoxic fjord basin strongly stimulates benthic denitrification and DNRA

(2015) Loreto De Brabandere et al.   BIOGEOCHEMISTRY

Benthic nitrogen metabolism in a macrophyte meadow (Vallisneria spiralis L.) under increasing sedimentary organic matter loads

(2015) Elisa Soana et al.   BIOGEOCHEMISTRY

Denitrification Dominates Sediment Nitrogen Removal and Is Enhanced by Bottom-Water Hypoxia in the Northern Gulf of Mexico

(2015) Mark J. McCarthy et al.   Estuaries and Coasts

Dissimilatory nitrate reduction to ammonium coupled to Fe(II) oxidation in sediments of a periodically hypoxic estuary

(2015) Elizabeth K. Robertson et al.   LIMNOLOGY AND OCEANOGRAPHY

Rhizosphere O2 dynamics in young Zostera marina and Ruppia maritima

(2015) Z Jovanovic et al.   MARINE ECOLOGY PROGRESS SERIES

Cable bacteria generate a firewall against euxinia in seasonally hypoxic basins

(2015) Dorina Seitaj et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rhizosphere O2 dynamics in young Zostera marina and Ruppia maritima

(2015) Z Jovanovic et al.   MARINE ECOLOGY PROGRESS SERIES

Seasonal oxygen, nitrogen and phosphorus benthic cycling along an impacted Baltic Sea estuary: regulation and spatial patterns

(2014) S. Bonaglia et al.   BIOGEOCHEMISTRY

Influence of bioturbation on denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in freshwater sediments

(2014) Geraldine Nogaro et al.   BIOGEOCHEMISTRY

Inorganic nitrogen transformations within permeable carbonate sands

(2014) Dirk V. Erler et al.   CONTINENTAL SHELF RESEARCH

Enhancement of denitrification in permeable carbonate sediment due to intra-granular porosity: A multi-scale modelling analysis

(2014) Adam J. Kessler et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Increased rates of dissimilatory nitrate reduction to ammonium (DNRA) under oxic conditions in a periodically hypoxic estuary

(2014) Keryn L. Roberts et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

The isotope effect of denitrification in permeable sediments

(2014) Adam J. Kessler et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Nitrate-dependent anaerobic methane oxidation in a freshwater sediment

(2014) Katrin á Norði et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Electric coupling between distant nitrate reduction and sulfide oxidation in marine sediment

(2014) Ugo Marzocchi et al.   ISME Journal

Nitrogen fixation in shallow-water sediments: Spatial distribution and controlling factors

(2014) Björn Andersson et al.   LIMNOLOGY AND OCEANOGRAPHY

Nitrogen cycling in deeply oxygenated sediments: Results in Lake Superior and implications for marine sediments

(2014) Jiying Li et al.   LIMNOLOGY AND OCEANOGRAPHY

The Fate of Nitrate in Intertidal Permeable Sediments

(2014) Hannah K. Marchant et al.   PLoS One

Deoxygenation of the Baltic Sea during the last century

(2014) J. Carstensen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Organic Matter Stoichiometry, Flux, and Oxygen Control Nitrogen Loss in the Ocean

(2014) A. R. Babbin et al.   SCIENCE

Oxygen at Nanomolar Levels Reversibly Suppresses Process Rates and Gene Expression in Anammox and Denitrification in the Oxygen Minimum Zone off Northern Chile

(2014) Tage Dalsgaard et al.   mBio

Meiofauna increases bacterial denitrification in marine sediments

(2014) S. Bonaglia et al.   Nature Communications

Predicting microbial nitrate reduction pathways in coastal sediments

(2013) CK Algar et al.   AQUATIC MICROBIAL ECOLOGY

Effect of reoxygenation and Marenzelleria spp. bioturbation on Baltic Sea sediment metabolism

(2013) S Bonaglia et al.   MARINE ECOLOGY PROGRESS SERIES

N2 fluxes in sediments of the Elbe Estuary and adjacent coastal zones

(2013) A Deek et al.   MARINE ECOLOGY PROGRESS SERIES

Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage

(2013) Mohamed F. Haroon et al.   NATURE

High rates of microbial carbon turnover in sediments in the deepest oceanic trench on Earth

(2013) Ronnie N. Glud et al.   Nature Geoscience

The Importance of Dissimilatory Nitrate Reduction to Ammonium (DNRA) in the Nitrogen Cycle of Coastal Ecosystems

(2013) Anne Giblin et al.   OCEANOGRAPHY

The Effects of Hypoxia on Sediment Nitrogen Cycling in the Baltic Sea

(2012) Helena Jäntti et al.   AMBIO

The potential effect of sustained hypoxia on nitrogen cycling in sediment from the southern North Sea: a mesocosm experiment

(2012) Elke C. Neubacher et al.   BIOGEOCHEMISTRY

The kinetics of denitrification in permeable sediments

(2012) Victor Evrard et al.   BIOGEOCHEMISTRY

Benthic metabolism and nitrogen dynamics in a sub-tropical coastal lagoon: Microphytobenthos stimulate nitrification and nitrate reduction through photosynthetic oxygen evolution

(2012) Ryan J.K. Dunn et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Sulfur, iron-, and calcium cycling associated with natural electric currents running through marine sediment

(2012) Nils Risgaard-Petersen et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Measuring nitrification in sediments – comparison of two techniques and three15NO measurement methods

(2012) Helena Jäntti et al.   ISOTOPES IN ENVIRONMENTAL AND HEALTH STUDIES

Potential importance of physiologically diverse benthic foraminifera in sedimentary nitrate storage and respiration

(2012) Joan M. Bernhard et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Hypoxic events stimulate nitrogen recycling in a shallow salt-wedge estuary: The Yarra River estuary, Australia

(2012) Keryn L. Roberts et al.   LIMNOLOGY AND OCEANOGRAPHY

Carbon mineralization and oxygen dynamics in sediments with deep oxygen penetration, Lake Superior

(2012) Jiying Li et al.   LIMNOLOGY AND OCEANOGRAPHY

Quantifying denitrification in rippled permeable sands through combined flume experiments and modeling

(2012) Adam J. Kessler et al.   LIMNOLOGY AND OCEANOGRAPHY

Denitrification, anammox and nitrate reduction in sediments of the southern Great Barrier Reef lagoon

(2012) DV Erler et al.   MARINE ECOLOGY PROGRESS SERIES

Filamentous bacteria transport electrons over centimetre distances

(2012) Christian Pfeffer et al.   NATURE

Benthic Nitrogen Loss in the Arabian Sea Off Pakistan

(2012) Sarah Sokoll et al.   Frontiers in Microbiology

New Pathways and Processes in the Global Nitrogen Cycle

(2011) Bo Thamdrup   Annual Review of Ecology Evolution and Systematics

Repeated Anaerobic Microbial Redox Cycling of Iron

(2011) Aaron J. Coby et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Seasonal variation in nitrification and nitrate-reduction pathways in coastal sediments in the Gulf of Finland, Baltic Sea

(2011) H Jäntti et al.   AQUATIC MICROBIAL ECOLOGY

Bioturbation: impact on the marine nitrogen cycle

(2011) Bonnie Laverock et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

The driving forces of porewater and groundwater flow in permeable coastal sediments: A review

(2011) Isaac R. Santos et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Denitrification in anoxic sediments supported by biological nitrate transport

(2011) M.G. Prokopenko et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Denitrification likely catalyzed by endobionts in an allogromiid foraminifer

(2011) Joan M Bernhard et al.   ISME Journal

Nitrogen cycling in a deep ocean margin sediment (Sagami Bay, Japan)

(2011) Ronnie N. Glud et al.   LIMNOLOGY AND OCEANOGRAPHY

Denitrification in shallow, sublittoral Gulf of Mexico permeable sediments

(2011) Thomas M. Gihring et al.   LIMNOLOGY AND OCEANOGRAPHY

Production of nitrogen gas via anammox and denitrification in intact sediment cores along a continental shelf to slope transect in the North Atlantic

(2011) Mark Trimmer et al.   LIMNOLOGY AND OCEANOGRAPHY

Short-term hypoxia alters the balance of the nitrogen cycle in coastal sediments

(2011) Elke C. Neubacher et al.   LIMNOLOGY AND OCEANOGRAPHY

Intensive and extensive nitrogen loss from intertidal permeable sediments of the Wadden Sea

(2011) Hang Gao et al.   LIMNOLOGY AND OCEANOGRAPHY

New approach for measuring denitrification in the rhizosphere of vegetated marsh sediments

(2011) Ketil Koop-Jakobsen et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Oxygen Sensitivity of Anammox and Coupled N-Cycle Processes in Oxygen Minimum Zones

(2011) Tim Kalvelage et al.   PLoS One

Diatoms respire nitrate to survive dark and anoxic conditions

(2011) A. Kamp et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A multi-proxy study of anaerobic ammonium oxidation in marine sediments of the Gullmar Fjord, Sweden

(2011) Joost Brandsma et al.   Environmental Microbiology Reports

Mass coral spawning: A natural large-scale nutrient addition experiment

(2010) Bradley D. Eyre et al.   LIMNOLOGY AND OCEANOGRAPHY

Spatial and temporal variability in nitrogenase activity and diazotrophic community composition in coastal microbial mats

(2010) I Severin et al.   MARINE ECOLOGY PROGRESS SERIES

Burrowing deeper into benthic nitrogen cycling: the impact of bioturbation on nitrogen fixation coupled to sulfate reduction

(2010) VJ Bertics et al.   MARINE ECOLOGY PROGRESS SERIES

Electric currents couple spatially separated biogeochemical processes in marine sediment

(2010) Lars Peter Nielsen et al.   NATURE

Effect of organic enrichment and thermal regime on denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in hypolimnetic sediments of two lowland lakes

(2010) Daniele Nizzoli et al.   WATER RESEARCH

Changes in Benthic Denitrification, Nitrate Ammonification, and Anammox Process Rates and Nitrate and Nitrite Reductase Gene Abundances along an Estuarine Nutrient Gradient (the Colne Estuary, United Kingdom)

(2009) L. F. Dong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ecophysiology and the energetic benefit of mixotrophic Fe(II) oxidation by various strains of nitrate-reducing bacteria

(2009) Eva Marie Muehe et al.   FEMS MICROBIOLOGY ECOLOGY

Aerobic denitrification in permeable Wadden Sea sediments

(2009) Hang Gao et al.   ISME Journal

Widespread occurrence of nitrate storage and denitrification among Foraminifera and Gromiida

(2009) E. Pina-Ochoa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Constraining denitrification in permeable wave-influenced marine sediment using linked hydrodynamic and biogeochemical modeling

(2008) M. Bayani Cardenas et al.   EARTH AND PLANETARY SCIENCE LETTERS

NO3 −-Driven SO4 2− Production in Freshwater Ecosystems: Implications for N and S Cycling

(2008) Amy J. Burgin et al.   ECOSYSTEMS

Denitrification, nitrate turnover, and aerobic respiration by benthic foraminiferans in the oxygen minimum zone off Chile

(2008) Signe Høgslund et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

An Earth-system perspective of the global nitrogen cycle

(2008) Nicolas Gruber et al.   NATURE

Spreading Dead Zones and Consequences for Marine Ecosystems

(2008) R. J. Diaz et al.   SCIENCE