Differential clustering of fecal and mucosa-associated microbiota in ‘healthy’ individuals

A microbial signature for Crohn's disease

(2017) Victoria Pascal et al.   GUT

Optimizing methods and dodging pitfalls in microbiome research

(2017) Dorothy Kim et al.   Microbiome

Therapeutic modulation of gut microbiota in inflammatory bowel disease: More questions to be answered

(2016) Yu Qi Qiao et al.   Journal of Digestive Diseases

The healthy human microbiome

(2016) Jason Lloyd-Price et al.   Genome Medicine

Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies

(2016) Se Jin Song et al.   mSystems

The relationship between faecal-associated and mucosal-associated microbiota in irritable bowel syndrome patients and healthy subjects

(2015) I. Rangel et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Conducting a Microbiome Study

(2014) Julia K. Goodrich et al.   CELL

The Treatment-Naive Microbiome in New-Onset Crohn’s Disease

(2014) Dirk Gevers et al.   Cell Host & Microbe

A randomly selected population sample undergoing colonoscopy

(2014) Lars Kjellström et al.   EUROPEAN JOURNAL OF GASTROENTEROLOGY & HEPATOLOGY

Effects of bowel cleansing on the intestinal microbiota

(2014) Jonna Jalanka et al.   GUT

Recent progress on the role of gut microbiota in the pathogenesis of inflammatory bowel disease

(2013) Cheng Gong Yu et al.   Journal of Digestive Diseases

Alterations in the Colonic Microbiota in Response to Osmotic Diarrhea

(2013) Gregor Gorkiewicz et al.   PLoS One

The Long-Term Stability of the Human Gut Microbiota

(2013) J. J. Faith et al.   SCIENCE

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

Storage conditions of intestinal microbiota matter in metagenomic analysis

(2012) Silvia Cardona et al.   BMC MICROBIOLOGY

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

(2012) Xochitl C Morgan et al.   GENOME BIOLOGY

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

Dysbiosis of the faecal microbiota in patients with Crohn's disease and their unaffected relatives

(2011) M. Joossens et al.   GUT

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

A Pyrosequencing Study in Twins Shows That Gastrointestinal Microbial Profiles Vary With Inflammatory Bowel Disease Phenotypes

(2010) Ben P. Willing et al.   GASTROENTEROLOGY

Assessing Gut Microbial Diversity from Feces and Rectal Mucosa

(2010) Ana Durbán et al.   MICROBIAL ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

A Molecular Analysis of Fecal and Mucosal Bacterial Communities in Irritable Bowel Syndrome

(2009) Caroline Codling et al.   DIGESTIVE DISEASES AND SCIENCES

Twin studies reveal specific imbalances in the mucosa-associated microbiota of patients with ileal Crohnʼs disease

(2008) Ben Willing et al.   INFLAMMATORY BOWEL DISEASES

Comparative Analysis of Human Gut Microbiota by Barcoded Pyrosequencing

(2008) Anders F. Andersson et al.   PLoS One

Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients

(2008) H. Sokol et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differential clustering of bowel biopsy-associated bacterial profiles of specimens collected in Mexico and Canada: what do these profiles represent?

(2007) R. Bibiloni et al.   JOURNAL OF MEDICAL MICROBIOLOGY