Comparative Genomics of Lactobacillus brevis Reveals a Significant Plasmidome Overlap of Brewery and Insect Isolates

Characterization of β-glucan formation by Lactobacillus brevis TMW 1.2112 isolated from slimy spoiled beer

(2018) Marion E. Fraunhofer et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Advances in the genomics and metabolomics of dairy lactobacilli: A review

(2017) Ewelina Stefanovic et al.   FOOD MICROBIOLOGY

Nomadic lifestyle of Lactobacillus plantarum revealed by comparative genomics of 54 strains isolated from different habitats

(2016) Maria Elena Martino et al.   ENVIRONMENTAL MICROBIOLOGY

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures

(2016) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

A Ready-to-Use Antifungal Starter Culture Improves the Shelf Life of Packaged Bread

(2016) C. L. GEREZ et al.   JOURNAL OF FOOD PROTECTION

The Identification of Novel Diagnostic Marker Genes for the Detection of Beer Spoiling Pediococcus damnosus Strains Using the BlAst Diagnostic Gene findEr

(2016) Jürgen Behr et al.   PLoS One

Identification of ecotype-specific marker genes for categorization of beer-spoiling Lactobacillus brevis

(2015) Jürgen Behr et al.   FOOD MICROBIOLOGY

Identification and characterization of wild lactobacilli and pediococci from spontaneously fermented Mountain Cheese

(2015) Ilaria Carafa et al.   FOOD MICROBIOLOGY

Molecular mechanisms behind the antimicrobial activity of hop iso-α-acids in Lactobacillus brevis

(2015) Benjamin C. Schurr et al.   FOOD MICROBIOLOGY

Identification of lactic acid bacteria isolated from wine using real-time PCR

(2015) Attila Kántor et al.   JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH PART B-PESTICIDES FOOD CONTAMINANTS AND AGRICULTURAL WASTES

GenBank

(2015) Karen Clark et al.   NUCLEIC ACIDS RESEARCH

Anvi’o: an advanced analysis and visualization platform for ‘omics data

(2015) A. Murat Eren et al.   PeerJ

Horizontal gene transfer among microorganisms in food: Current knowledge and future perspectives

(2014) Franca Rossi et al.   FOOD MICROBIOLOGY

Putrescine production via the ornithine decarboxylation pathway improves the acid stress survival of Lactobacillus brevis and is part of a horizontally transferred acid resistance locus

(2014) Andrea Romano et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Effects of Intake of Pickles Containing Lactobacillus brevis on Immune Activity and Bowel Symptoms in Female Students

(2014) Yukio TAKII et al.   JOURNAL OF NUTRITIONAL SCIENCE AND VITAMINOLOGY

STRING v10: protein–protein interaction networks, integrated over the tree of life

(2014) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Evolution of Bacterial Consortia in Spontaneously Started Rye Sourdoughs during Two Months of Daily Propagation

(2014) Marianna Bessmeltseva et al.   PLoS One

A Comparative Pan-Genome Perspective of Niche-Adaptable Cell-Surface Protein Phenotypes in Lactobacillus rhamnosus

(2014) Ravi Kant et al.   PLoS One

The Fungal Aroma Gene ATF1 Promotes Dispersal of Yeast Cells through Insect Vectors

(2014) Joaquin F. Christiaens et al.   Cell Reports

Strain-specific probiotics properties of Lactobacillus fermentum, Lactobacillus plantarum and Lactobacillus brevis isolates from Brazilian food products

(2013) Cíntia Lacerda Ramos et al.   FOOD MICROBIOLOGY

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

(2013) Ross Overbeek et al.   NUCLEIC ACIDS RESEARCH

Data, information, knowledge and principle: back to metabolism in KEGG

(2013) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

CMG-Biotools, a Free Workbench for Basic Comparative Microbial Genomics

(2013) Tammi Vesth et al.   PLoS One

Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation

(2012) Jeff R Broadbent et al.   BMC GENOMICS

Gegenees: Fragmented Alignment of Multiple Genomes for Determining Phylogenomic Distances and Genetic Signatures Unique for Specified Target Groups

(2012) Joakim Ågren et al.   PLoS One

Low-diversity bacterial community in the gut of the fruitfly Drosophila melanogaster

(2011) Chun Nin Adam Wong et al.   ENVIRONMENTAL MICROBIOLOGY

Genomic analysis reveals Lactobacillus sanfranciscensis as stable element in traditional sourdoughs

(2011) Rudi F Vogel et al.   Microbial Cell Factories

TreeGraph 2: Combining and visualizing evidence from different phylogenetic analyses

(2010) Ben C Stöver et al.   BMC BIOINFORMATICS

Bacterial species associated with traditional starter cultures used for fermented bamboo shoot production in Manipur state of India

(2010) K. Jeyaram et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Mechanisms of Hop Inhibition Include the Transmembrane Redox Reaction

(2009) J. Behr et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Comparative genomics of lactic acid bacteria reveals a niche-specific gene set

(2009) Orla O'Sullivan et al.   BMC MICROBIOLOGY

Mechanisms of Hop Inhibition: Hop Ionophores

(2009) Jürgen Behr et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Evidence of horizontal transfer as origin of strain to strain variation of the tyramine production trait in Lactobacillus brevis

(2008) E COTON et al.   FOOD MICROBIOLOGY

KEGG Atlas mapping for global analysis of metabolic pathways

(2008) S. Okuda et al.   NUCLEIC ACIDS RESEARCH