Phylogenetic relationships of Hemiptera inferred from mitochondrial and nuclear genes

Higher-level phylogeny of paraneopteran insects inferred from mitochondrial genome sequences

(2015) Hu Li et al.   Scientific Reports

Phylogenomics resolves the timing and pattern of insect evolution

(2014) B. Misof et al.   SCIENCE

Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny

(2013) Stephen L. Cameron   Annual Review of Entomology

DAMBE5: A Comprehensive Software Package for Data Analysis in Molecular Biology and Evolution

(2013) Xuhua Xia   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

A comparative analysis of complete mitochondrial genomes among Hexapoda

(2013) Sabrina Simon et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment

(2013) Nicolas Lartillot et al.   SYSTEMATIC BIOLOGY

Phylogenetically informative rearrangements in mitochondrial genomes of Coleoptera, and monophyly of aquatic elateriform beetles (Dryopoidea)

(2012) Martijn J.T.N. Timmermans et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Accelerated Evolution of Mitochondrial but Not Nuclear Genomes of Hymenoptera: New Evidence from Crabronid Wasps

(2012) Martin Kaltenpoth et al.   PLoS One

A Molecular Phylogeny of Hemiptera Inferred from Mitochondrial Genome Sequences

(2012) Nan Song et al.   PLoS One

Resolving Discrepancy between Nucleotides and Amino Acids in Deep-Level Arthropod Phylogenomics: Differentiating Serine Codons in 21-Amino-Acid Models

(2012) Andreas Zwick et al.   PLoS One

Insect phylogenomics: results, problems and the impact of matrix composition

(2012) H. O. Letsch et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Evolutionary Root of Flowering Plants

(2012) Vadim V. Goremykin et al.   SYSTEMATIC BIOLOGY

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Phylogenomics of Hemiptera (Insecta: Paraneoptera) based on mitochondrial genomes

(2012) YING CUI et al.   SYSTEMATIC ENTOMOLOGY

Systematic Error in Seed Plant Phylogenomics

(2011) Bojian Zhong et al.   Genome Biology and Evolution

Reconstructing intraordinal relationships in Lepidoptera using mitochondrial genome data with the description of two newly sequenced lycaenids, Spindasis takanonis and Protantigius superans (Lepidoptera: Lycaenidae)

(2011) Min Jee Kim et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Higher-level phylogeny of the insect order Hemiptera: is Auchenorrhyncha really paraphyletic?

(2011) JASON R. CRYAN et al.   SYSTEMATIC ENTOMOLOGY

The Complete Mitochondrial Genome Sequence of the Planthopper,Sivaloka damnosus

(2010) Nan Song et al.   JOURNAL OF INSECT SCIENCE

Automated Removal of Noisy Data in Phylogenomic Analyses

(2010) Vadim V. Goremykin et al.   JOURNAL OF MOLECULAR EVOLUTION

FASconCAT: Convenient handling of data matrices

(2010) Patrick Kück et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Exploring the molecular phylogeny of phasmids with whole mitochondrial genome sequences

(2010) Natuo Kômoto et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences

(2010) Jerome C. Regier et al.   NATURE

New Views on Strand Asymmetry in Insect Mitochondrial Genomes

(2010) Shu-Jun Wei et al.   PLoS One

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

When phylogenetic assumptions are violated: base compositional heterogeneity and among-site rate variation in beetle mitochondrial phylogenomics

(2010) HOJUN SONG et al.   SYSTEMATIC ENTOMOLOGY

The complete mitochondrial genome sequence of Geisha distinctissima (Hemiptera: Flatidae) and comparison with other hemipteran insects

(2009) N. Song et al.   ACTA BIOCHIMICA ET BIOPHYSICA SINICA

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

Phylogenetic analysis of the true water bugs (Insecta: Hemiptera: Heteroptera: Nepomorpha): evidence from mitochondrial genomes

(2009) Jimeng Hua et al.   BMC EVOLUTIONARY BIOLOGY

The complete mitochondrial genomes of two band-winged grasshoppers, Gastrimargus marmoratus and Oedaleus asiaticus

(2009) Chuan Ma et al.   BMC GENOMICS

Phylogenetic approaches for the analysis of mitochondrial genome sequence data in the Hymenoptera – A lineage with both rapidly and slowly evolving mitochondrial genomes

(2009) Mark Dowton et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A mitochondrial genome phylogeny of the Neuropterida (lace-wings, alderflies and snakeflies) and their relationship to the other holometabolous insect orders

(2009) Stephen L. Cameron et al.   ZOOLOGICA SCRIPTA

Complete Mitochondrial Genome of the Small Brown Planthopper,Laodelphax striatellus(Delphacidae: Hemiptera), with a Novel Gene Order

(2009) Nan Song et al.   ZOOLOGICAL SCIENCE

Empirical profile mixture models for phylogenetic reconstruction

(2008) Le Si Quang et al.   BIOINFORMATICS

Comparative and phylogenomic studies on the mitochondrial genomes of Pentatomomorpha (Insecta: Hemiptera: Heteroptera)

(2008) Jimeng Hua et al.   BMC GENOMICS

A preliminary mitochondrial genome phylogeny of Orthoptera (Insecta) and approaches to maximizing phylogenetic signal found within mitochondrial genome data

(2008) J. Daniel Fenn et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION