Opsin transcripts of predatory diving beetles: a comparison of surface and subterranean photic niches

Parallel reduction in expression, but no loss of functional constraint, in two opsin paralogs within cave populations of Gammarus minus (Crustacea: Amphipoda)

(2013) David B Carlini et al.   BMC EVOLUTIONARY BIOLOGY

Extraordinarily low evolutionary rates of short wavelength-sensitive opsin pseudogenes

(2013) Shozo Yokoyama et al.   GENE

Biological Clocks and Visual Systems in Cave-Adapted Animals at the Dawn of Speleogenomics

(2013) M. Friedrich   INTEGRATIVE AND COMPARATIVE BIOLOGY

Identification of trophic niches of subterranean diving beetles in a calcrete aquifer by DNA and stable isotope analyses

(2013) Tessa M. Bradford et al.   MARINE AND FRESHWATER RESEARCH

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Evolution of eye development in the darkness of caves: adaptation, drift, or both?

(2013) Sylvie Rétaux et al.   EvoDevo

EVIDENCE FOR REPEATED LOSS OF SELECTIVE CONSTRAINT IN RHODOPSIN OF AMBLYOPSID CAVEFISHES (TELEOSTEI: AMBLYOPSIDAE)

(2012) Matthew L. Niemiller et al.   EVOLUTION

Evolution of Blind Beetles in Isolated Aquifers: A Test of Alternative Modes of Speciation

(2012) Remko Leijs et al.   PLoS One

Expression of UV-Sensitive Parapinopsin in the Iguana Parietal Eyes and Its Implication in UV-Sensitivity in Vertebrate Pineal-Related Organs

(2012) Seiji Wada et al.   PLoS One

Evidence for population fragmentation within a subterranean aquatic habitat in the Western Australian desert

(2011) M T Guzik et al.   HEREDITY

Spectral sensitivity of the principal eyes of sunburst diving beetle, Thermonectus marmoratus (Coleoptera: Dytiscidae), larvae

(2011) S. Maksimovic et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Phototransduction and clock gene expression in the troglobiont beetle Ptomaphagus hirtus of Mammoth cave

(2011) M. Friedrich et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Photic niche invasions: phylogenetic history of the dim-light foraging augochlorine bees (Halictidae)

(2011) S. M. Tierney et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Shedding new light on opsin evolution

(2011) M. L. Porter et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A Blind Circadian Clock in Cavefish Reveals that Opsins Mediate Peripheral Clock Photoreception

(2011) Nicola Cavallari et al.   PLOS BIOLOGY

Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology

(2010) W. Delport et al.   BIOINFORMATICS

Genes, modules and the evolution of cave fish

(2010) H Wilkens   HEREDITY

Evolution in caves: Darwin’s ‘wrecks of ancient life’ in the molecular era

(2010) CARLOS JUAN et al.   MOLECULAR ECOLOGY

The evolution of phototransduction from an ancestral cyclic nucleotide gated pathway

(2010) D. C. Plachetzki et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Regressive Evolution inAstyanaxCavefish

(2009) William R. Jeffery   Annual Review of Genetics

Spatial distribution of opsin-encoding mRNAs in the tiered larval retinas of the sunburst diving beetle Thermonectus marmoratus (Coleoptera: Dytiscidae)

(2009) S. Maksimovic et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Fine-scale comparative phylogeography of a sympatric sister species triplet of subterranean diving beetles from a single calcrete aquifer in Western Australia

(2009) M. T. GUZIK et al.   MOLECULAR ECOLOGY

Evolution of Dim-Light and Color Vision Pigments

(2008) Shozo Yokoyama   Annual Review of Genomics and Human Genetics

Phylogeography of the ancient Parabathynellidae (Crustacea�:�Bathynellacea) from the Yilgarn region of Western Australia

(2008) M. T. Guzik et al.   INVERTEBRATE SYSTEMATICS

Subterranean archipelago: mitochondrial DNA phylogeography of stygobitic isopods (Oniscidea�:�Haloniscus) from the Yilgarn region of Western Australia

(2008) Steven J. B. Cooper et al.   INVERTEBRATE SYSTEMATICS

Systematics and evolution of the Australian subterranean hydroporine diving beetles (Dytiscidae), with notes onCarabhydrus

(2008) Remko Leys et al.   INVERTEBRATE SYSTEMATICS