Phylotranscriptomic analysis uncovers a wealth of tissue inhibitor of metalloproteinases variants in echinoderms

Mechanical Mutability in Connective Tissue of Starfish Body Wall

(2016) Tatsuo Motokawa   BIOLOGICAL BULLETIN

dendextend: an R package for visualizing, adjusting and comparing trees of hierarchical clustering

(2015) Tal Galili   BIOINFORMATICS

Anticancer Activity of Sea Cucumber Triterpene Glycosides

(2015) Dmitry Aminin et al.   Marine Drugs

Mechanical Properties of the Compass Depressors of the Sea-Urchin Paracentrotus lividus (Echinodermata, Echinoidea) and the Effects of Enzymes, Neurotransmitters and Synthetic Tensilin-Like Protein

(2015) Iain C. Wilkie et al.   PLoS One

Normalization of the tumor microenvironment: evidence for tissue inhibitor of metalloproteinase-2 as a cancer therapeutic

(2014) William G. Stetler-Stevenson et al.   CONNECTIVE TISSUE RESEARCH

The InterPro protein families database: the classification resource after 15 years

(2014) Alex Mitchell et al.   NUCLEIC ACIDS RESEARCH

Softenin, a Novel Protein That Softens the Connective Tissue of Sea Cucumbers through Inhibiting Interaction between Collagen Fibrils

(2014) Yasuhiro Takehana et al.   PLoS One

Phylogenomic analysis of echinoderm class relationships supports Asterozoa

(2014) M. J. Telford et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Matrix Metalloproteinases in a Sea Urchin Ligament with Adaptable Mechanical Properties

(2012) Ana R. Ribeiro et al.   PLoS One

Pruning Rogue Taxa Improves Phylogenetic Accuracy: An Efficient Algorithm and Webservice

(2012) Andre J. Aberer et al.   SYSTEMATIC BIOLOGY

Endogenous Angiogenesis Inhibitor Blocks Tumor Growth via Direct and Indirect Effects on Tumor Microenvironment

(2011) Dimitra Bourboulia et al.   AMERICAN JOURNAL OF PATHOLOGY

Matrix Metalloproteinases: Regulators of the Tumor Microenvironment

(2010) Kai Kessenbrock et al.   CELL

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Cervical ripening and insufficiency: From biochemical and molecular studies to in vivo clinical examination

(2009) Dietmar Schlembach et al.   European Journal of Obstetrics & Gynecology and Reproductive Biology

PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium

(2009) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY