Broadscale Ecological Patterns Are Robust to Use of Exact Sequence Variants versus Operational Taxonomic Units
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Broadscale Ecological Patterns Are Robust to Use of Exact Sequence Variants versus Operational Taxonomic Units
Authors
Keywords
-
Journal
mSphere
Volume 3, Issue 4, Pages -
Publisher
American Society for Microbiology
Online
2018-07-26
DOI
10.1128/msphere.00148-18
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Sequence clustering threshold has little effect on the recovery of microbial community structure
- (2018) Synnøve Smebye Botnen et al. Molecular Ecology Resources
- A global atlas of the dominant bacteria found in soil
- (2018) Manuel Delgado-Baquerizo et al. SCIENCE
- Ecological dynamics and co-occurrence among marine phytoplankton, bacteria and myoviruses shows microdiversity matters
- (2017) David M Needham et al. ISME Journal
- Exact sequence variants should replace operational taxonomic units in marker-gene data analysis
- (2017) Benjamin J Callahan et al. ISME Journal
- A communal catalogue reveals Earth’s multiscale microbial diversity
- (2017) Luke R. Thompson et al. NATURE
- Extracellular enzyme kinetics and thermodynamics along a climate gradient in southern California
- (2017) Nameer R. Baker et al. SOIL BIOLOGY & BIOCHEMISTRY
- Microdiversity shapes the traits, niche space, and biogeography of microbial taxa
- (2017) Alyse A. Larkin et al. Environmental Microbiology Reports
- Microdiversity of an Abundant Terrestrial Bacterium Encompasses Extensive Variation in Ecologically Relevant Traits
- (2017) Alexander B. Chase et al. mBio
- Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns
- (2017) Amnon Amir et al. mSystems
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- Minimum entropy decomposition: Unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences
- (2014) A Murat Eren et al. ISME Journal
- UPARSE: highly accurate OTU sequences from microbial amplicon reads
- (2013) Robert C Edgar NATURE METHODS
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions
- (2010) Marcus J. Claesson et al. NUCLEIC ACIDS RESEARCH
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates
- (2009) Victor Kunin et al. ENVIRONMENTAL MICROBIOLOGY
- Taxonomic resolution, ecotypes and the biogeography ofProchlorococcus
- (2008) Adam C. Martiny et al. ENVIRONMENTAL MICROBIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now